NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss165985437           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chrM_8252
RefSNP(rs#)rs375217967
Submitted Batch IDNA20431_snpassay_chrM
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss165985437|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 ACAATCGAGT AGTACTCCCG ATTGAAGCCC CCATTCGTAT AATAATTACA TCACAAGACG
 TCTTGCACTC ATGAGCTGTC CCCACATTAG GCTTAAAAAC AGATGCAATT CCCGGACGTC
 TAAACCAAAC CACTTTCACC GCTACACGAC CGGGGGTATA CTACGGTCAA TGCTCTGAAA
 TCTGTGGAGC AAACCACAGT TTCATGCCCA TCGTCCTAGA ATTAATTCCC CTAAAAATCT
 TTGAAATAGG
 R
 CCCGTATTTA CCCTATAGCA CCCCCTCTAC CCCCTCTAGA GCCCACTGTA AAGCTAACTT
 AGCATTAACC TTTTAAGTTA AAGATTAAGA GAACCAACAC CTCTTTACAG TGAAATGCCC
 CAACTAAATA CTACCGTATG GCCCACCATA ATTACCCCCA TACTCCTTAC ACTATTCCTC
 ATCACCCAAC TAAAAATATT AAACACAAAC TACCACCTAC CTCCCTCACC AAAGCCCATA
 AAAATAAAAA

  Submitted Frequency for ss165985437 back to top
There is no frequency submission for ss165985437.


  dbSNP summary of Genotypes for ss165985437 back to top
No sufficient data to compute Hardy-weinberg probability for ss165985437.


  Submitted individual genotype for ss165985437 back to top
There is no individual genotype data for ss165985437.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement