NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss165985518           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chrM_14581
RefSNP(rs#)rs28496897
Submitted Batch IDNA20431_snpassay_chrM
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss165985518|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 ACAACCACCA CCCCATCATA CTCTTTCACC CACAGCACCA ATCCTACCTC CATCGCTAAC
 CCCACTAAAA CACTCACCAA GACCTCAACC CCTGACCCCC ATGCCTCAGG ATACTCCTCA
 ATAGCCATCG CTGTAGTATA TCCAAAGACA ACCATCATTC CCCCTAAATA AATTAAAAAA
 ACTATTAAAC CCATATAACC TCCCCCAAAA TTCAGAATAA TAACACACCC GACCACACCG
 CTAACAATCA
 R
 TACTAAACCC CCATAAATAG GAGAAGGCTT AGAAGAAAAC CCCACAAACC CCATTACTAA
 ACCCACACTC AACAGAAACA AAGCATACAT CATTATTCTC GCACGGACTA CAACCACGAC
 CAATGATATG AAAAACCATC GTTGTATTTC AACTACAAGA ACACCAATGA CCCCAATACG
 CAAAATTAAC CCCCTAATAA AATTAATTAA CCACTCATTC ATCGACCTCC CCACCCCATC
 CAACATCTCC

  Submitted Frequency for ss165985518 back to top
There is no frequency submission for ss165985518.


  dbSNP summary of Genotypes for ss165985518 back to top
No sufficient data to compute Hardy-weinberg probability for ss165985518.


  Submitted individual genotype for ss165985518 back to top
There is no individual genotype data for ss165985518.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement