NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss168823666           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr11_184801
RefSNP(rs#)rs12223376
Submitted Batch IDNA19240_snpassay_chr11
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss168823666|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TTTAATCAAT AAAGCCTCTT CCGCAGCTCA GGCTCCTGTC TCTGCCCCCA CAGAGGGGCA
 CACAAATGGG GACATCAGGA ACACACTCGG GGCCACAGCC ACACACACAG ACCCACATAC
 AGAGGATCCC ACTCAAGGAG CACACGTGCG AAAGTCCCCA CAGAGGGACA CACAAATGGG
 GACATCAGGA ACACAGGGCC ACAGCCACAC ACACAGACCC ACATACAGAG GATCCTACTC
 AAGGAGCACA
 Y
 GTGCGAAAGT CCCCCACAGA GGGACACACA AATGGGGACA TCAGGAACAC AGGGCCACAG
 CCACACACAC AGACCCACAT ACAGAGGATC CCACTCAAGG AACACACGTG TGAAAGTCCC
 CACAGAGGTA CACACAAATG GGGACATCAG GAACACAGGG CCACAGCCAC ACACACAGAC
 CCACATACAG AGGATCCCAC TCAAGGAACA CACGTGTGAA AGTCCCCACA GAGGTACACA
 CAGGGTCCAC

  Submitted Frequency for ss168823666 back to top
There is no frequency submission for ss168823666.


  dbSNP summary of Genotypes for ss168823666 back to top
No sufficient data to compute Hardy-weinberg probability for ss168823666.


  Submitted individual genotype for ss168823666 back to top
There is no individual genotype data for ss168823666.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement