| Submitter | | Handle | SC_SNP | | Submitter SNP ID | SC-CHRX_NA10470-200402.chr11.NT_009237.16_39810652 | | RefSNP(rs#) | rs6650166 | | Submitted Batch ID | SC-CHRX_NA10470-200402 | | Submitted Date | Feb 20, 2004 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_009237
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHRX_NA10470 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 6 | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence position qualityXSNP55696-11i11.q1k 779 40 |
>gnl|dbSNP|ss18052658|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic TTAGTAGATG CATCTTTGAT TTATGTTTCA TTTCAGTAAA CAGTTCCCTG TTTCGTCTAT
AAAATAAATG ATTAcagaca tatctcattt tataactctt tgctttattg tgctttgcag
atattgaatt ttttacatat ggaaagtcta tggcaaccct gtgttgggca aatttattgg
tgccactttt ttttcaacac tatgcgctca cttcctgttt cagtgtcaca ttttagtaat
tttcacaatg ttttaaattt ttcattgtta ttatatctgt tatggtgatc tgggaccaat
gatctttgat cttattattg taattgtttt ggggtgccac aaaccaagcc cttataagac
agcatacata atagataaat gtgtgttctc actgctccac tcactggctg ttcccttgtc
tttctccctc tacttggacc tctctattcc ctgagacaaa acaatattga aattaggcca
attaataacc ctacaatggc
Y
tttaagtttg ccagtgaaag gaagagatgc acgtctctca ctttaaatta aaaactagaa
gtgattaaac ttagtgagaa aggcatgttg aaagccaaga tagatatgtt aaaagctagg
cctcttgtgc caaacaatta gccaagttgt gaatgcaaag gaaaagctct tgaaggaaat
taaaatgcca ctccagtaaa gacatgaatg ataagaaaat gaaacagcct tattgctgat
atgaggaaag ttttagtgct ctgtataaaa gatcaagcaa accacaacat tccctaaatg
aaagactaat ccagaccaat gttctaattg tcttcatttc tataaaggcc tgaaggtaaa
aaaaaagaaa aaaaaaaact tgcagaagaa aagcttgaag ctagcggagg ctggttaatg
aggtttaagg aaagaagcca tctccataaa ataaaagtgc aaggtgaagc agcaagtgct
gatggctgat gtagaagctA
There is no frequency submission for ss18052658.
No sufficient data to compute Hardy-weinberg probability for ss18052658.
There is no individual genotype data for ss18052658.
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