>gnl|dbSNP|ss44155335|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
TCCCACCCTC CTTCTGGATG GCCCAGGGGA GGTCATCCCA TTGGGTCATG TTGGGTGAGA
AGAGCTGTCT CAAATCCTGA CCCTGTCCCT GACCTTGACC CCTACTACAT CCCAAATCCC
AAGACCTGGT CCCAGAATCC AAGCCCTGGG TTCTGACATT CAGTGGACTG TGAGGAGGAC
AGTTCAGGGA AGGGACCAAG GACATCCCTG CGTCAGCCTC CATCCTGCTG AGAACTCACT
CGAGTCCTGT GTTTCTGGGG CTCCAGTGCT GCCTGCATAT CTGGGATCCC AGAGAGAAGG
Y
GAGAAGGGTT TATGGTGGGG AGTTAGTGAG CATCAGGCAC TTGGGGTTCT CCATCCTGCC
CAGCATGGCC CCTTCCAGAA CAGGCACACG GTGTTTACGA CCTCCTCCCC CTCTGCCAGA
GTCCCCACTC TGCCAGAGTG GCAGGTGGAG AAGCTGTGGG CACTGTCGTG GTGGCTGCCC
AGAACCCCGA CACCCTTTCT CTTGGAGGGC AGCTAGGGTG CAGGCCCAAG CACGGCCAGG
CCCATGCCCC TGCCCAGGCT TAGCTCAGCC AGAAAAGATT CGTCGTGGCT GCAGCAGAGC
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HAPMAP-CHB | 82 | 82 | T=0.68292683
| C=0.31707317 | C/T=0.53658539
T/T=0.41463414
C/C=0.04878049
| Pr(chiSq=2.342,df=1)
=0.150 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | T=0.75581396
| C=0.24418604 | T/T=0.55813956
C/T=0.39534885
C/C=0.04651163
| Pr(chiSq=0.217,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | T=0.51020408
| C=0.48979592 | C/T=0.40816328
T/T=0.30612245
C/C=0.28571430
| Pr(chiSq=1.647,df=1)
=0.200 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | T=0.62000000
| C=0.38000000 | C/T=0.60000002
T/T=0.31999999
C/C=0.08000000
| Pr(chiSq=3.736,df=1)
=0.100 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | T=0.75294119
| C=0.24705882 | T/T=0.55294120
C/T=0.40000001
C/C=0.04705882
| Pr(chiSq=0.480,df=1)
=0.527 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | T=0.73255813
| C=0.26744187 | T/T=0.51162791
C/T=0.44186047
C/C=0.04651163
| Pr(chiSq=1.402,df=1)
=0.251 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | T=0.85795456
| C=0.14204545 | T/T=0.73863637
C/T=0.23863636
C/C=0.02272727
| Pr(chiSq=0.039,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.73863637
| C=0.26136363 | T/T=0.56818181
C/T=0.34090909
C/C=0.09090909
| Pr(chiSq=1.206,df=1)
=0.273 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | T=0.50555557
| C=0.49444443 | C/T=0.52222222
T/T=0.24444444
C/C=0.23333333
| Pr(chiSq=0.179,df=1)
=0.752 | Genotype
Freq. |
| HapMap-YRI | 224 | 224 | C=0.64285713
| T=0.35714287 | C/T=0.44642857
C/C=0.41964287
T/T=0.13392857
| Pr(chiSq=0.086,df=1)
=1.000 | Genotype
Freq. |
| HapMap-CEU | 226 | 226 | T=0.72123891
| C=0.27876106 | T/T=0.48672566
C/T=0.46902654
C/C=0.04424779
| Pr(chiSq=3.130,df=1)
=0.100 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | T=0.65734267
| C=0.34265736 | C/T=0.44755244
T/T=0.43356642
C/C=0.11888112
| Pr(chiSq=0.006,df=1)
=1.000 | Genotype
Freq. |
