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Submitted SNP(ss) Details: ss44201           
Submitter
HandleKWOK
Submitter SNP IDOVLP-11288
RefSNP(rs#)rs27434
Submitted Batch IDOVLP-1-98
Submitted DateApr 28, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPApr 28 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:RPCI-11_31O11 SequenceAccession1:AC009073 SequenceSource1:JGI SequencePhase1:5X SequenceContigName1:Contig115 SequenceContigPosition1:1725 SequenceLocalName2:CITB-H1_2245H8 SequenceAccession2:AC026435 SequenceSource2:JGI SequencePhase2:5X SequenceContigName2:Contig51 SequenceContigPosition2:2566 PolyBayesConfidence:98

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss44201|allelePos=101|len=201|taxid=9606|alleles='G/A'|mol=Genomic
 GACAAAGTAA AAATTATATA AATAGCCTTA TATGTCCCAT AGAAGCAATA TAAATGTAGT
 TTATACTTTA TTAAAAGTGT GAATGAGCTT ATACCTGGTG
 R
 GCCAGTTCAT GGGCCACAGT CATTGTGATG TCAAGCTTAC TTGATGCAGA AGACTTTTCT
 GCATCAAACA ACAGAGCAGA TTCTCTATAT GTTGTCAGTC

  Submitted Frequency for ss44201 back to top
There is no frequency submission for ss44201.


  dbSNP summary of Genotypes for ss44201 back to top
No sufficient data to compute Hardy-weinberg probability for ss44201.


  Submitted individual genotype for ss44201 back to top
There is no individual genotype data for ss44201.

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