| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_004321.15_1011795 | | RefSNP(rs#) | rs9424282 | | Submitted Batch ID | CHR1_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004321
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_OVERLAP_SNPS | | Ascertainment Samplesize | 13 | | Population | N.D. |
| | Allele | | Observed Allele | T/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:1bB531C17-18g09.p1cposition:360quality:40sequence:1bB531C17-21g06.p1cposition:-278quality:35sequence:1bB15E13-2i23.p1kposition:-422quality:51sequence:1bB15E13-1c12.q1kposition:-159quality:51sequence:1bB15E13-1k06.p1kposition:-267quality:51sequence:1bB15E13-2n16.q1kposition:157quality:56sequence:1bB15E13-3b07.p1kposition:163quality:39sequence:1bB15E13-3h18.p1kposition:256quality:39sequence:1bB15E13-1n23.p1kposition:137quality:39sequence:1bB15E13-3b02.p1kposition:270quality:40sequence:1bB531C17-23e06.q1cposition:-317quality:37sequence:1bB15E13-1b08.q1kposition:423quality:56 |
>gnl|dbSNP|ss12992562|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic GGGGCAGGCA CTGCGAGCAA ACCCTTCTGT CCCAGCTTCC TCTAGGGCTG GAGGAAGACC
CTGCTCAGGA TGCAAAGCCT GACCCTCGGG GATCTCTGGC AGCCTCGGTG CCGGCTCTGC
CCCCAGAGAG GAGGCAACAG CATGTGGGCC CCCTGGAAGC CAGCACTCGC CCTTGGTCAG
TGTGGCTGGT GAGTCCTAGT
Y
ACACTGGGTG TGGAGGAGAC AGGTAGGGCT GGACTTGATA GACTCTGAAC AGAGTTGGGG
ATGGGCTGAT TACTCAGAGG ACACCTCCTG CTTCGCCTGG AATGGATGGC AGGGGTGATG
GAATTTCTCA AGCCCCAAGT TGTGAAGGAA ATGAAAAAAG GAACCTGCTG GAATCCTCCG
GCTCAAGCAA TCAAGCTGCT
There is no frequency submission for ss12992562.
No sufficient data to compute Hardy-weinberg probability for ss12992562.
There is no individual genotype data for ss12992562.
| 
