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Submitted SNP(ss) Details: ss116989939           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000076274_NCBI36.1_chr4_54846797
RefSNP(rs#)rs2228230
Submitted Batch IDILLUMINA_WTSI:NA18507_c4
Submitted DateJan 18, 2009
Publication Cited18987734
First entry to dbSNPJan 18 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss116989939|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 CTACGCAGGT CAGGGAGTCT GAAATCATCA GGCATCTACT CTTCTCTAGA GCTTTCTCTC
 TGTTGGGAGT GGGTGGAGTG AGAACCTGGG AGAAGGCCAG CCCTTTATAT CCAGGCAGAC
 AGCTCCAAGT GCCACCATGG ATCAGCCAGT CTTGCAGGGG TGATGCTATT CAGCTACAGA
 TGGCTTGATC CTGAGTCATT TCTTCCTTTT CCATGCAGTG TGTCCACCGT GATCTGGCTG
 CTCGCAACGT
 Y
 CTCCTGGCAC AAGGAAAAAT TGTGAAGATC TGTGACTTTG GCCTGGCCAG AGACATCATG
 CATGATTCGA ACTATGTGTC GAAAGGCAGT GTACGTCCTC ACTTCCCTCA CTGGTCAGGC
 TCATCCTCCT TCACTTTAAT CTCTAAAGTC AGGTGTTGCT TCTAGAGATT CGGTGCCTGT
 TTTTTAAAAC ATCAATAGAT TTCAAGGGGT CAGTACACTG CCTTGGCAGC AGATTGCCCA
 GGTTTGAGTG

  Submitted Frequency for ss116989939 back to top
There is no frequency submission for ss116989939.


  dbSNP summary of Genotypes for ss116989939 back to top
No sufficient data to compute Hardy-weinberg probability for ss116989939.


  Submitted individual genotype for ss116989939 back to top
There is no individual genotype data for ss116989939.

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