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Submitted SNP(ss) Details: ss117534085           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000040985_NCBI36.1_chr20_33225696
RefSNP(rs#)rs2069946
Submitted Batch IDILLUMINA_WTSI:NA18507_c20
Submitted DateJan 19, 2009
Publication Cited18987734
First entry to dbSNPJan 19 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss117534085|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 GACTGCCTAC GTGCAAACCT TGGCTCTGCT ACACTATCTC TGTCTCAGTT TCCCATGTAG
 ACTGGGGTTA ATAATAGTAG CTATTGCATT AAGCCACTGG GGAAAGGCAC AAAGATAATA
 ATGTATGTAA AGCCCATTGC CCAGGTTATA ATAAGCACTG AATCGACATT GGCTATGATT
 ATTTTTGATT AATGAAGGGG AGGGGGTTAT GGCACTGGAA GATTTTAAGT AGGAAAAGGA
 CATGATCTCA
 Y
 CCCTGGGTCA GGTGGAGGTC GGAATAGAGA ACGGGGAGAT GAAGTAGAAA GTTACTACCC
 CAGTCTAGAT GAGACGGATG AATCCTGAAT CAGGGCAGTG GAAGAGGAGA TGGAGAACAG
 GCGATGGAAT TGGAATTTTA TTCAGGTCAG GATTTGTTAA CCATTTGTTC CGTTGGTTAA
 CAGGAAACGG GGGGAGGGAG AGCCGAGGGT GAAAAAGGAG GCAGAAAGGA GTGTCTCTTC
 CACTGCAGGC

  Submitted Frequency for ss117534085 back to top
There is no frequency submission for ss117534085.


  dbSNP summary of Genotypes for ss117534085 back to top
No sufficient data to compute Hardy-weinberg probability for ss117534085.


  Submitted individual genotype for ss117534085 back to top
There is no individual genotype data for ss117534085.

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