| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_037485.3_2675461 | | RefSNP(rs#) | rs8559 | | Submitted Batch ID | CHR1_Overlap_SNPs | | Submitted Date | Oct 22, 2003 | | Publication Cited | [1] Overlap SNPs found by comparing shotgun reads to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 22 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_037485
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_OVERLAP_SNPS | | Ascertainment Samplesize | 8 | | Population | N.D. |
| | Allele | | Observed Allele | A/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:1bA290H1-31h09.q1cposition:200quality:50sequence:1bA290H1-38e07.p1cposition:-281quality:37sequence:1bA290H1-40g06.q1cposition:284quality:56sequence:1bA290H1-50c09.p1cposition:502quality:25sequence:1bA290H1-36d11.p1cposition:-411quality:40sequence:1bA290H1-45c09.q1cposition:-181quality:37sequence:1bA290H1-52d07.p1cposition:-68quality:25 |
>gnl|dbSNP|ss13043767|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic CAAGTTCCCT GGGTTGTTCC CCTCATAAGG TATTAGGGAC TTGTGTCACA TCTCTCTGGA
GTTTTCTATT TTAAAGAGGA ATCTGAAAGC AATAAGCTCT TTGGTCTTCT TAAGATGGCT
ACACCTCAAT TTAAGATGGG GTATTCTTTC ACTAGTTGAG GAGTAGAAGA GGATGACCAG
CTAGACTCCC ATGGAATTGG
R
ACTCCTATTC CTTGCTTAGA CATTACAGGT TATGCTTTGA GATCTCTTTG GGGTGAAGGA
TTGAAATTAA ACCCTGAGCC ACCGTGTCCT TGTAGAGCAC AGAGTAGAGA ACAACTGGCA
GCTTTGAAAA AACACCATGA AGAAGAAATC GTTCATCATA AGAAGGAGAT TGAGCGTCTG
CAGAAAGAAA TTGAGCGCCA
There is no frequency submission for ss13043767.
No sufficient data to compute Hardy-weinberg probability for ss13043767.
There is no individual genotype data for ss13043767.
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