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Submitted SNP(ss) Details: ss162980837           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_744366
RefSNP(rs#)rs3115859
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980837|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 CAAGGCTCTC AGCACAACAA GACTCTATGA TTCTGTCTAT TGGAACAAAA AGCCAGTGAG
 GCAAGTGTAT CATCCTGTTG ATGAATTCAC AGCATTAACT CTGGGAGTTG GGGACAGTGT
 GTATTCTTCC TCCAGACACT CTCTGTTTCT CCTGGATGGA AAGGTTCTGC TACTTGTCCC
 GTGGTCAGGC CCAGCCAATG GAACGGAATG GAAGTGACTC TGCCCCTTAT TGGCAGAAAC
 TTTAAAAGCC
 R
 CACAACGTTC CTGCACCCTC CCCTCTGCCA TGAGCCTGGC AGTGCTCAGG ATGGGAAAAT
 TATCTCACCT GGGCCTGAGG ATACAGGAGC TACCCCCAGC CTGCAGTGGA AGAGAAGCAT
 GGACAAGTGA TTAAACTTTG TGTTTTCAAG CCACAGAGGT TTTTTGAAGT TGTTTGCTAC
 CATGCTTTGT CCCTACAAAC ACAGTCATGG AGAAGGCCAG TGGCAGAGCC TGAGCCGTTC
 GCGCATCTGT

  Submitted Frequency for ss162980837 back to top
There is no frequency submission for ss162980837.


  dbSNP summary of Genotypes for ss162980837 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980837.


  Submitted individual genotype for ss162980837 back to top
There is no individual genotype data for ss162980837.

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