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Submitted SNP(ss) Details: ss163016300           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chrX_5504827
RefSNP(rs#)rs2840186
Submitted Batch IDNA07022_snpassay_chrX
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163016300|allelePos=251|len=501|taxid=9606|alleles='G/T'|mol=Genomic
 GTCTTACAGG CAAAAGTCAT ATGGAGTAGC ACATGGGAGA AGTTTGCTAA AATCTCCTGC
 AAATATGAAC TTTACATTTG CAGAGAATGT CATCTGGAAT GGGAAATGTT CATTTACTTT
 TTGTAGGTAT TTATTGTCAT GAAAGTAATT TCACCCTATG CCCCTGTTGC AGGATTTTAG
 AAAAACCACT GGTTGCCATC ATTGGAAAGT GGTAATTTAA AAGCTTTAAG CTTGGTAACC
 CCAAAGGTTT
 K
 GGGGAAAATA TTAGTTCTAC CTGGTTTAAA GTATCTAGAG AGGACCCTGC AGTCTTTGAA
 CCACAGTGGT CCAATCTAAA GATATAGTCA ATGCATTATT CAGTGTGTTT TAATGGAATG
 GGAGACAGAG GTGAGTGGGA GACAGAGGTG AGTAGGAGAC ATCGTATATG ACACAGGACA
 TTTGACAAAG ACTAGAGACA TTTTTGATTT GGAGCGCACT GATGGCATCT AGTTGGTAGA
 GGCCAGAGAT

  Submitted Frequency for ss163016300 back to top
There is no frequency submission for ss163016300.


  dbSNP summary of Genotypes for ss163016300 back to top
No sufficient data to compute Hardy-weinberg probability for ss163016300.


  Submitted individual genotype for ss163016300 back to top
There is no individual genotype data for ss163016300.

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