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Submitted SNP(ss) Details: ss16546424           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr11.NT_033899.6_6040314
RefSNP(rs#)rs2245897
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402615936.R -92 37

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16546424|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 TTTTTTTTGT TATTTACCAA GTGGCAAAAG GAGAAAAACA GTCACTTTTA ATGAAGTTGG
 TCAGCTAGTT ACAAAAATTG AAGTAAACTT GATTGATTTG AACCCAACTC AACTGAAACA
 TTTGATTAGT CTTCATTTGG GGGCCTTTTT CCATTCTGAT TACAGAAAAG TTAGATGATT
 ACAGTATAAT TGAATTTGTC
 Y
 TCCAAGTAAT CCCAAACTCC CCATGCATTC AACCCAATCG CCTGTATCTC CTGCATTCAC
 TTCAAAATTT CTTAGTAGCA ACTGCTGTTC ATAATGATGG CTCTGAGACA CATAAGATCC
 TGAATCATCA AGGCAAGATT ACATTATACT GTGCTGACTT AGGGTGGAAA GTGAACTGGT
 AACTGTTAGA AAGCTTTTGG

  Submitted Frequency for ss16546424 back to top
There is no frequency submission for ss16546424.


  dbSNP summary of Genotypes for ss16546424 back to top
No sufficient data to compute Hardy-weinberg probability for ss16546424.


  Submitted individual genotype for ss16546424 back to top
There is no individual genotype data for ss16546424.

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