Name: rs2245897
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2245897

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr11:102625731 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>A / C>G / C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.254928 (67477/264690, TOPMED)
C=0.234270 (54270/231656, ALFA)
C=0.256097 (35850/139986, GnomAD) (+ 19 more)
C=0.25144 (19786/78692, PAGE_STUDY)
C=0.08960 (2532/28258, 14KJPN)
C=0.09124 (1529/16758, 8.3KJPN)
C=0.2447 (1567/6404, 1000G_30x)
C=0.2402 (1203/5008, 1000G)
C=0.2460 (1102/4480, Estonian)
C=0.2242 (864/3854, ALSPAC)
C=0.2203 (817/3708, TWINSUK)
C=0.0966 (283/2930, KOREAN)
C=0.2513 (474/1886, HapMap)
C=0.1015 (186/1832, Korea1K)
C=0.228 (228/998, GoNL)
C=0.069 (55/792, PRJEB37584)
C=0.243 (146/600, NorthernSweden)
C=0.124 (66/532, SGDP_PRJ)
C=0.241 (52/216, Qatari)
C=0.014 (3/216, Vietnamese)
C=0.07 (4/56, Siberian)
C=0.33 (13/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: MMP20 : 2KB Upstream Variant
LOC101928477 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	236692	C=0.234617	A=0.000000, T=0.765383
European	Sub	207602	C=0.233842	A=0.000000, T=0.766158
African	Sub	8224	C=0.3234	A=0.0000, T=0.6766
African Others	Sub	332	C=0.349	A=0.000, T=0.651
African American	Sub	7892	C=0.3224	A=0.0000, T=0.6776
Asian	Sub	3824	C=0.0714	A=0.0000, T=0.9286
East Asian	Sub	3092	C=0.0841	A=0.0000, T=0.9159
Other Asian	Sub	732	C=0.018	A=0.000, T=0.982
Latin American 1	Sub	1040	C=0.2538	A=0.0000, T=0.7462
Latin American 2	Sub	6650	C=0.2364	A=0.0000, T=0.7636
South Asian	Sub	366	C=0.230	A=0.000, T=0.770
Other	Sub	8986	C=0.2374	A=0.0000, T=0.7626

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	C=0.254928	T=0.745072
Allele Frequency Aggregator	Total	Global	231656	C=0.234270	A=0.000000, T=0.765730
Allele Frequency Aggregator	European	Sub	204508	C=0.233942	A=0.000000, T=0.766058
Allele Frequency Aggregator	Other	Sub	8186	C=0.2366	A=0.0000, T=0.7634
Allele Frequency Aggregator	African	Sub	7082	C=0.3243	A=0.0000, T=0.6757
Allele Frequency Aggregator	Latin American 2	Sub	6650	C=0.2364	A=0.0000, T=0.7636
Allele Frequency Aggregator	Asian	Sub	3824	C=0.0714	A=0.0000, T=0.9286
Allele Frequency Aggregator	Latin American 1	Sub	1040	C=0.2538	A=0.0000, T=0.7462
Allele Frequency Aggregator	South Asian	Sub	366	C=0.230	A=0.000, T=0.770
gnomAD - Genomes	Global	Study-wide	139986	C=0.256097	T=0.743903
gnomAD - Genomes	European	Sub	75848	C=0.22434	T=0.77566
gnomAD - Genomes	African	Sub	41910	C=0.32677	T=0.67323
gnomAD - Genomes	American	Sub	13628	C=0.24472	T=0.75528
gnomAD - Genomes	Ashkenazi Jewish	Sub	3316	C=0.3094	T=0.6906
gnomAD - Genomes	East Asian	Sub	3134	C=0.0798	T=0.9202
gnomAD - Genomes	Other	Sub	2150	C=0.2456	T=0.7544
The PAGE Study	Global	Study-wide	78692	C=0.25144	T=0.74856
The PAGE Study	AfricanAmerican	Sub	32512	C=0.32631	T=0.67369
The PAGE Study	Mexican	Sub	10806	C=0.25986	T=0.74014
The PAGE Study	Asian	Sub	8318	C=0.0861	T=0.9139
The PAGE Study	PuertoRican	Sub	7916	C=0.2191	T=0.7809
The PAGE Study	NativeHawaiian	Sub	4534	C=0.0876	T=0.9124
The PAGE Study	Cuban	Sub	4230	C=0.2340	T=0.7660
The PAGE Study	Dominican	Sub	3828	C=0.2691	T=0.7309
The PAGE Study	CentralAmerican	Sub	2450	C=0.2457	T=0.7543
The PAGE Study	SouthAmerican	Sub	1982	C=0.2134	T=0.7866
The PAGE Study	NativeAmerican	Sub	1260	C=0.2587	T=0.7413
The PAGE Study	SouthAsian	Sub	856	C=0.176	T=0.824
14KJPN	JAPANESE	Study-wide	28258	C=0.08960	T=0.91040
8.3KJPN	JAPANESE	Study-wide	16758	C=0.09124	T=0.90876
1000Genomes_30x	Global	Study-wide	6404	C=0.2447	T=0.7553
1000Genomes_30x	African	Sub	1786	C=0.3634	T=0.6366
1000Genomes_30x	Europe	Sub	1266	C=0.2441	T=0.7559
1000Genomes_30x	South Asian	Sub	1202	C=0.2121	T=0.7879
1000Genomes_30x	East Asian	Sub	1170	C=0.0983	T=0.9017
1000Genomes_30x	American	Sub	980	C=0.244	T=0.756
1000Genomes	Global	Study-wide	5008	C=0.2402	T=0.7598
1000Genomes	African	Sub	1322	C=0.3616	T=0.6384
1000Genomes	East Asian	Sub	1008	C=0.0962	T=0.9038
1000Genomes	Europe	Sub	1006	C=0.2425	T=0.7575
1000Genomes	South Asian	Sub	978	C=0.215	T=0.785
1000Genomes	American	Sub	694	C=0.251	T=0.749
Genetic variation in the Estonian population	Estonian	Study-wide	4480	C=0.2460	T=0.7540
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.2242	T=0.7758
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.2203	T=0.7797
KOREAN population from KRGDB	KOREAN	Study-wide	2930	C=0.0966	A=0.0000, G=0.0000, T=0.9034
HapMap	Global	Study-wide	1886	C=0.2513	T=0.7487
HapMap	American	Sub	764	C=0.220	T=0.780
HapMap	African	Sub	692	C=0.340	T=0.660
HapMap	Asian	Sub	254	C=0.114	T=0.886
HapMap	Europe	Sub	176	C=0.239	T=0.761
Korean Genome Project	KOREAN	Study-wide	1832	C=0.1015	T=0.8985
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	C=0.228	T=0.772
CNV burdens in cranial meningiomas	Global	Study-wide	792	C=0.069	T=0.931
CNV burdens in cranial meningiomas	CRM	Sub	792	C=0.069	T=0.931
Northern Sweden	ACPOP	Study-wide	600	C=0.243	T=0.757
SGDP_PRJ	Global	Study-wide	532	C=0.124	T=0.876
Qatari	Global	Study-wide	216	C=0.241	T=0.759
A Vietnamese Genetic Variation Database	Global	Study-wide	216	C=0.014	T=0.986
Siberian	Global	Study-wide	56	C=0.07	T=0.93
The Danish reference pan genome	Danish	Study-wide	40	C=0.33	T=0.68

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 11	NC_000011.10:g.102625731C>A
GRCh38.p14 chr 11	NC_000011.10:g.102625731C>G
GRCh38.p14 chr 11	NC_000011.10:g.102625731C>T
GRCh37.p13 chr 11	NC_000011.9:g.102496462C>A
GRCh37.p13 chr 11	NC_000011.9:g.102496462C>G
GRCh37.p13 chr 11	NC_000011.9:g.102496462C>T
MMP20 RefSeqGene	NG_012151.1:g.4602G>T
MMP20 RefSeqGene	NG_012151.1:g.4602G>C
MMP20 RefSeqGene	NG_012151.1:g.4602G>A

Gene: MMP20, matrix metallopeptidase 20 (minus strand) : 2KB Upstream Variant

Molecule type	Change	Amino acid[Codon]	SO Term
MMP20 transcript	NM_004771.4:c.	N/A	Upstream Transcript Variant

Gene: LOC101928477, uncharacterized LOC101928477 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC101928477 transcript variant X4	XR_001748340.2:n.	N/A	Intron Variant
LOC101928477 transcript variant X5	XR_001748341.2:n.	N/A	Genic Upstream Transcript Variant
LOC101928477 transcript variant X2	XR_007062866.1:n.	N/A	Genic Upstream Transcript Variant
LOC101928477 transcript variant X6	XR_007062867.1:n.	N/A	Genic Upstream Transcript Variant
LOC101928477 transcript variant X1	XR_947957.3:n.	N/A	Genic Upstream Transcript Variant
LOC101928477 transcript variant X3	XR_947958.3:n.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	A	G	T
GRCh38.p14 chr 11	NC_000011.10:g.102625731=	NC_000011.10:g.102625731C>A	NC_000011.10:g.102625731C>G	NC_000011.10:g.102625731C>T
GRCh37.p13 chr 11	NC_000011.9:g.102496462=	NC_000011.9:g.102496462C>A	NC_000011.9:g.102496462C>G	NC_000011.9:g.102496462C>T
MMP20 RefSeqGene	NG_012151.1:g.4602=	NG_012151.1:g.4602G>T	NG_012151.1:g.4602G>C	NG_012151.1:g.4602G>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

129 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	TSC-CSHL	ss3374150	Sep 28, 2001 (100)
2	SC_JCM	ss3517678	Sep 28, 2001 (100)
3	BCM_SSAHASNP	ss10701103	Jul 11, 2003 (116)
4	SC_SNP	ss15629676	Feb 27, 2004 (120)
5	CSHL-HAPMAP	ss16546424	Feb 27, 2004 (120)
6	CSHL-HAPMAP	ss17438425	Feb 27, 2004 (120)
7	SSAHASNP	ss20857220	Apr 05, 2004 (121)
8	EGP_SNPS	ss28446747	Sep 20, 2004 (123)
9	ABI	ss38732421	Mar 13, 2006 (126)
10	ILLUMINA	ss65749567	Oct 16, 2006 (127)
11	ILLUMINA	ss74887450	Dec 06, 2007 (129)
12	HGSV	ss86185659	Dec 15, 2007 (130)
13	BCMHGSC_JDW	ss88750510	Mar 24, 2008 (129)
14	HUMANGENOME_JCVI	ss97506037	Feb 06, 2009 (130)
15	BGI	ss106766203	Feb 06, 2009 (130)
16	1000GENOMES	ss110972895	Jan 25, 2009 (130)
17	1000GENOMES	ss115083352	Jan 25, 2009 (130)
18	KRIBB_YJKIM	ss119424065	Dec 01, 2009 (131)
19	ENSEMBL	ss132784340	Dec 01, 2009 (131)
20	ENSEMBL	ss137876616	Dec 01, 2009 (131)
21	GMI	ss156720669	Dec 01, 2009 (131)
22	ILLUMINA	ss160521233	Dec 01, 2009 (131)
23	COMPLETE_GENOMICS	ss168721461	Jul 04, 2010 (132)
24	COMPLETE_GENOMICS	ss170778557	Jul 04, 2010 (132)
25	ILLUMINA	ss173212311	Jul 04, 2010 (132)
26	COMPLETE_GENOMICS	ss175261037	Jul 04, 2010 (132)
27	BUSHMAN	ss203134829	Jul 04, 2010 (132)
28	BCM-HGSC-SUB	ss207535296	Jul 04, 2010 (132)
29	1000GENOMES	ss225429085	Jul 14, 2010 (132)
30	1000GENOMES	ss235695129	Jul 15, 2010 (132)
31	1000GENOMES	ss242298154	Jul 15, 2010 (132)
32	BL	ss255361445	May 09, 2011 (134)
33	GMI	ss281148046	May 04, 2012 (137)
34	GMI	ss286445459	Apr 25, 2013 (138)
35	PJP	ss291126746	May 09, 2011 (134)
36	ILLUMINA	ss480483682	May 04, 2012 (137)
37	ILLUMINA	ss480498042	May 04, 2012 (137)
38	ILLUMINA	ss481299235	Sep 08, 2015 (146)
39	ILLUMINA	ss485039333	May 04, 2012 (137)
40	ILLUMINA	ss537061496	Sep 08, 2015 (146)
41	TISHKOFF	ss562786827	Apr 25, 2013 (138)
42	SSMP	ss658309419	Apr 25, 2013 (138)
43	ILLUMINA	ss778860827	Sep 08, 2015 (146)
44	ILLUMINA	ss782965902	Sep 08, 2015 (146)
45	ILLUMINA	ss783927715	Sep 08, 2015 (146)
46	ILLUMINA	ss832222174	Sep 08, 2015 (146)
47	ILLUMINA	ss834321613	Sep 08, 2015 (146)
48	EVA-GONL	ss988898761	Aug 21, 2014 (142)
49	JMKIDD_LAB	ss1077998054	Aug 21, 2014 (142)
50	1000GENOMES	ss1342723567	Aug 21, 2014 (142)
51	DDI	ss1426742630	Apr 01, 2015 (144)
52	EVA_GENOME_DK	ss1575916078	Apr 01, 2015 (144)
53	EVA_DECODE	ss1598562907	Apr 01, 2015 (144)
54	EVA_UK10K_ALSPAC	ss1627331116	Apr 01, 2015 (144)
55	EVA_UK10K_TWINSUK	ss1670325149	Apr 01, 2015 (144)
56	EVA_SVP	ss1713280233	Apr 01, 2015 (144)
57	ILLUMINA	ss1751990959	Sep 08, 2015 (146)
58	HAMMER_LAB	ss1806969967	Sep 08, 2015 (146)
59	WEILL_CORNELL_DGM	ss1932261365	Feb 12, 2016 (147)
60	ILLUMINA	ss1946320891	Feb 12, 2016 (147)
61	ILLUMINA	ss1959380495	Feb 12, 2016 (147)
62	GENOMED	ss1967443191	Jul 19, 2016 (147)
63	JJLAB	ss2026875021	Sep 14, 2016 (149)
64	USC_VALOUEV	ss2155186805	Dec 20, 2016 (150)
65	HUMAN_LONGEVITY	ss2185198843	Dec 20, 2016 (150)
66	SYSTEMSBIOZJU	ss2627910723	Nov 08, 2017 (151)
67	ILLUMINA	ss2632880257	Nov 08, 2017 (151)
68	GRF	ss2699491515	Nov 08, 2017 (151)
69	GNOMAD	ss2903770163	Nov 08, 2017 (151)
70	SWEGEN	ss3008684270	Nov 08, 2017 (151)
71	ILLUMINA	ss3021370361	Nov 08, 2017 (151)
72	BIOINF_KMB_FNS_UNIBA	ss3027236179	Nov 08, 2017 (151)
73	CSHL	ss3349766719	Nov 08, 2017 (151)
74	ILLUMINA	ss3625608202	Oct 12, 2018 (152)
75	ILLUMINA	ss3626737413	Oct 12, 2018 (152)
76	ILLUMINA	ss3630894907	Oct 12, 2018 (152)
77	ILLUMINA	ss3632997462	Oct 12, 2018 (152)
78	ILLUMINA	ss3633697353	Oct 12, 2018 (152)
79	ILLUMINA	ss3634472482	Oct 12, 2018 (152)
80	ILLUMINA	ss3635388682	Oct 12, 2018 (152)
81	ILLUMINA	ss3636156599	Oct 12, 2018 (152)
82	ILLUMINA	ss3637139580	Oct 12, 2018 (152)
83	ILLUMINA	ss3637927100	Oct 12, 2018 (152)
84	ILLUMINA	ss3640179819	Oct 12, 2018 (152)
85	ILLUMINA	ss3641020288	Oct 12, 2018 (152)
86	ILLUMINA	ss3641314811	Oct 12, 2018 (152)
87	ILLUMINA	ss3642923882	Oct 12, 2018 (152)
88	ILLUMINA	ss3644573750	Oct 12, 2018 (152)
89	URBANLAB	ss3649690764	Oct 12, 2018 (152)
90	ILLUMINA	ss3651737311	Oct 12, 2018 (152)
91	EGCUT_WGS	ss3676005887	Jul 13, 2019 (153)
92	EVA_DECODE	ss3692482362	Jul 13, 2019 (153)
93	ILLUMINA	ss3725271077	Jul 13, 2019 (153)
94	ACPOP	ss3738488760	Jul 13, 2019 (153)
95	ILLUMINA	ss3744089806	Jul 13, 2019 (153)
96	ILLUMINA	ss3744773277	Jul 13, 2019 (153)
97	EVA	ss3749736723	Jul 13, 2019 (153)
98	PAGE_CC	ss3771648502	Jul 13, 2019 (153)
99	ILLUMINA	ss3772273063	Jul 13, 2019 (153)
100	PACBIO	ss3787050999	Jul 13, 2019 (153)
101	PACBIO	ss3792177838	Jul 13, 2019 (153)
102	PACBIO	ss3797060336	Jul 13, 2019 (153)
103	KHV_HUMAN_GENOMES	ss3815070074	Jul 13, 2019 (153)
104	EVA	ss3832808337	Apr 26, 2020 (154)
105	EVA	ss3839965769	Apr 26, 2020 (154)
106	EVA	ss3845446960	Apr 26, 2020 (154)
107	SGDP_PRJ	ss3877014728	Apr 26, 2020 (154)
108	KRGDB	ss3925455990	Apr 26, 2020 (154)
109	KOGIC	ss3970631483	Apr 26, 2020 (154)
110	EVA	ss3984656298	Apr 26, 2021 (155)
111	TOPMED	ss4897827562	Apr 26, 2021 (155)
112	TOMMO_GENOMICS	ss5203620530	Apr 26, 2021 (155)
113	1000G_HIGH_COVERAGE	ss5288692184	Oct 16, 2022 (156)
114	EVA	ss5315572793	Oct 16, 2022 (156)
115	EVA	ss5401859667	Oct 16, 2022 (156)
116	HUGCELL_USP	ss5483701859	Oct 16, 2022 (156)
117	EVA	ss5510496300	Oct 16, 2022 (156)
118	1000G_HIGH_COVERAGE	ss5585069689	Oct 16, 2022 (156)
119	SANFORD_IMAGENETICS	ss5624283919	Oct 16, 2022 (156)
120	SANFORD_IMAGENETICS	ss5651953329	Oct 16, 2022 (156)
121	TOMMO_GENOMICS	ss5751991013	Oct 16, 2022 (156)
122	EVA	ss5799852758	Oct 16, 2022 (156)
123	YY_MCH	ss5812726045	Oct 16, 2022 (156)
124	EVA	ss5837146256	Oct 16, 2022 (156)
125	EVA	ss5847645742	Oct 16, 2022 (156)
126	EVA	ss5850125269	Oct 16, 2022 (156)
127	EVA	ss5921412692	Oct 16, 2022 (156)
128	EVA	ss5943275346	Oct 16, 2022 (156)
129	EVA	ss5979369757	Oct 16, 2022 (156)
130	1000Genomes	NC_000011.9 - 102496462	Oct 12, 2018 (152)
131	1000Genomes_30x	NC_000011.10 - 102625731	Oct 16, 2022 (156)
132	The Avon Longitudinal Study of Parents and Children	NC_000011.9 - 102496462	Oct 12, 2018 (152)
133	Genetic variation in the Estonian population	NC_000011.9 - 102496462	Oct 12, 2018 (152)
134	The Danish reference pan genome	NC_000011.9 - 102496462	Apr 26, 2020 (154)
135	gnomAD - Genomes	NC_000011.10 - 102625731	Apr 26, 2021 (155)
136	Genome of the Netherlands Release 5	NC_000011.9 - 102496462	Apr 26, 2020 (154)
137	HapMap	NC_000011.10 - 102625731	Apr 26, 2020 (154)
138	KOREAN population from KRGDB	NC_000011.9 - 102496462	Apr 26, 2020 (154)
139	Korean Genome Project	NC_000011.10 - 102625731	Apr 26, 2020 (154)
140	Northern Sweden	NC_000011.9 - 102496462	Jul 13, 2019 (153)
141	The PAGE Study	NC_000011.10 - 102625731	Jul 13, 2019 (153)
142	CNV burdens in cranial meningiomas	NC_000011.9 - 102496462	Apr 26, 2021 (155)
143	Qatari	NC_000011.9 - 102496462	Apr 26, 2020 (154)
144	SGDP_PRJ	NC_000011.9 - 102496462	Apr 26, 2020 (154)
145	Siberian	NC_000011.9 - 102496462	Apr 26, 2020 (154)
146	8.3KJPN	NC_000011.9 - 102496462	Apr 26, 2021 (155)
147	14KJPN	NC_000011.10 - 102625731	Oct 16, 2022 (156)
148	TopMed	NC_000011.10 - 102625731	Apr 26, 2021 (155)
149	UK 10K study - Twins	NC_000011.9 - 102496462	Oct 12, 2018 (152)
150	A Vietnamese Genetic Variation Database	NC_000011.9 - 102496462	Jul 13, 2019 (153)
151	ALFA	NC_000011.10 - 102625731	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs17099167	Oct 08, 2004 (123)
rs60650469	May 26, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
32633384, ss3925455990	NC_000011.9:102496461:C:A	NC_000011.10:102625730:C:A	(self)
2719735401	NC_000011.10:102625730:C:A	NC_000011.10:102625730:C:A	(self)
32633384, ss3925455990	NC_000011.9:102496461:C:G	NC_000011.10:102625730:C:G	(self)
ss86185659, ss88750510, ss110972895, ss115083352, ss168721461, ss170778557, ss175261037, ss203134829, ss207535296, ss255361445, ss281148046, ss286445459, ss291126746, ss480483682, ss1598562907, ss1713280233, ss3642923882	NC_000011.8:102001671:C:T	NC_000011.10:102625730:C:T	(self)
55296585, 30687286, 21744135, 2710459, 13697066, 32633384, 11773625, 205782, 14303295, 29031708, 7703159, 61589837, 30687286, 6810622, ss225429085, ss235695129, ss242298154, ss480498042, ss481299235, ss485039333, ss537061496, ss562786827, ss658309419, ss778860827, ss782965902, ss783927715, ss832222174, ss834321613, ss988898761, ss1077998054, ss1342723567, ss1426742630, ss1575916078, ss1627331116, ss1670325149, ss1751990959, ss1806969967, ss1932261365, ss1946320891, ss1959380495, ss1967443191, ss2026875021, ss2155186805, ss2627910723, ss2632880257, ss2699491515, ss2903770163, ss3008684270, ss3021370361, ss3349766719, ss3625608202, ss3626737413, ss3630894907, ss3632997462, ss3633697353, ss3634472482, ss3635388682, ss3636156599, ss3637139580, ss3637927100, ss3640179819, ss3641020288, ss3641314811, ss3644573750, ss3651737311, ss3676005887, ss3738488760, ss3744089806, ss3744773277, ss3749736723, ss3772273063, ss3787050999, ss3792177838, ss3797060336, ss3832808337, ss3839965769, ss3877014728, ss3925455990, ss3984656298, ss5203620530, ss5315572793, ss5401859667, ss5510496300, ss5624283919, ss5651953329, ss5799852758, ss5837146256, ss5847645742, ss5943275346, ss5979369757	NC_000011.9:102496461:C:T	NC_000011.10:102625730:C:T	(self)
72595624, 390201332, 684798, 27009484, 869971, 85828117, 113373218, 2719735401, ss2185198843, ss3027236179, ss3649690764, ss3692482362, ss3725271077, ss3771648502, ss3815070074, ss3845446960, ss3970631483, ss4897827562, ss5288692184, ss5483701859, ss5585069689, ss5751991013, ss5812726045, ss5850125269, ss5921412692	NC_000011.10:102625730:C:T	NC_000011.10:102625730:C:T	(self)
ss10701103	NT_033899.5:6040301:C:T	NC_000011.10:102625730:C:T	(self)
ss15629676, ss16546424, ss17438425, ss20857220	NT_033899.6:6040313:C:T	NC_000011.10:102625730:C:T	(self)
ss3374150, ss3517678, ss28446747, ss38732421, ss65749567, ss74887450, ss97506037, ss106766203, ss119424065, ss132784340, ss137876616, ss156720669, ss160521233, ss173212311	NT_033899.8:6058877:C:T	NC_000011.10:102625730:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs2245897

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs2245897