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Submitted SNP(ss) Details: ss166932131           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr5_110771074
RefSNP(rs#)rs152882
Submitted Batch IDNA20431_snpassay_chr5
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss166932131|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 TCTAATCCCA CCTACTCGAG AGGCTGAGGC AAGAGAATCG CTTGAACCTG GGAGGCGGAG
 GTTGCAGTAA GCTGAGATCG CGCCACTGCA CTCTAGCCTG GGTGACAGAG AGAGACTCCT
 TAAAAAAAAA AAAAAGAAAA GAAAAACACA AAAACAACAC CCCAAAGTAT ACTAATAGAG
 AAGTACTCAC AGTGTCCTTT TGAGGTCCAG AAAGGCATGC ACTGTTTCTG ATTATCATGA
 ATAAAGAGAA
 R
 GAAAAAAGTG AGGAATCAAG CTGTAAGGAA ATAAGCTTTT AAGATTACAC ATTTTAATTA
 CATTAAAAAA TGCTCATTCC AAACAAGTAT ATGTAGACCA TGACAGGAAG GATATTATCA
 CAATATCTTA AACAAACAAC AACAACAAAA ACAACACTTT ACCCTAATTG ACAATTTGGC
 CTGTATGTAT TCTGTTCTTA TGATATTCAA TGCTCTGAAA AGCTGAAATC ATGAACAAGG
 AATTCTGCCA

  Submitted Frequency for ss166932131 back to top
There is no frequency submission for ss166932131.


  dbSNP summary of Genotypes for ss166932131 back to top
No sufficient data to compute Hardy-weinberg probability for ss166932131.


  Submitted individual genotype for ss166932131 back to top
There is no individual genotype data for ss166932131.

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