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Submitted SNP(ss) Details: ss1868239           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000925-67688
RefSNP(rs#)rs167769
Submitted Batch IDOVLP-000925-5-0
Submitted DateOct 06, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPOct 6 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC018673 SequenceAccession1:AC018673 SequenceVersion1:3 SequenceContigName1:Contig7 SequenceContigPosition1:6938 SequenceLocalName2:AC023237 SequenceAccession2:AC023237 SequenceVersion2:16 SequenceContigName2:Contig9 SequenceContigPosition2:5265 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1868239|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 GGTAACCAGT GGTTTCCCAG GGGCCTCTCA GTTCACGTTT CTCATAATAT CCCTCTCCCA
 GAGATGAGGG AGAGGATGGG ATGACAACTC CCCAGGTCTC CCCAAACCCA GTAACCCCAA
 GTCCTCCTGT TGCACGTTCA GCCTCTCACC TCTCCCAGGC CTCTCAGAGG GATGGAAAAT
 GGAGAGGTCC CTTCTCTGGA
 Y
 GTTTCTGCTC CAAGACCTTC ATGCCCCTCT TTCCTCCAGT GCCCACTTAC CCCAGCTCTT
 TTCTCCTCAA GGCAGAATCC TTACCCCTCC TGCTCAGGTT CCTCCAATAG GCCTTTCTCT
 AGCCCAAGAG AGAAAGGTCC TCTGGAGTGA GTGGGCACCG CTTTCCTCTG CATCCCCTTG
 CAGAGTGACC AGCCTCCTGG

  Submitted Frequency for ss1868239 back to top
There is no frequency submission for ss1868239.


  dbSNP summary of Genotypes for ss1868239 back to top
No sufficient data to compute Hardy-weinberg probability for ss1868239.


  Submitted individual genotype for ss1868239 back to top
There is no individual genotype data for ss1868239.

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