Submitted SNP(ss) Details: ss24385598

Submitted SNP(ss) Details: ss24385598

Submitter
Handle	PERLEGEN
Submitter SNP ID	afd4242375
RefSNP(rs#)	rs7915
Submitted Batch ID	AFD_EUR_18-MAY-2004
Submitted Date	Aug 21, 2004
Publication Cited	N.D.
First entry to dbSNP	Aug 10 2004 12:00:00:000AM

Resource Links
GenBank Accession	NC_000015.5
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFD_CHIP_HYB
Ascertainment Samplesize	48
Population	AFD_EUR_PANEL

Allele
Observed Allele	A/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 ATCTGCCTAC TCTCCTCCAC GTGCAGGCCA AGAGCACTGA AGACACCCTG GTCCTCCCGG
 AAGGGCAGTC CCACAGGCAG CGGCACCC
 ATTTCTGGGC CC
 M
 GCCACAGGAC GT
 CCGATGGGAG AGCTTGTCTG GCTCTACTGA TGATGGATAG GCCCCTTCCT GAGCCTTGGT
 GTCCCTGGAA TGAGGAAAGA TTCTCCAT

Submitted Frequency for ss24385598

There is no frequency submission for ss24385598.

dbSNP summary of Genotypes for ss24385598

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AFD_EUR_PANEL - NORTH AMERICA	48	48	A=0.58333331	C=0.41666666	A/C=0.41666666 A/A=0.37500000 C/C=0.20833333	Pr(chiSq=0.490,df=1) =0.527	Genotype Freq.
AFD_AFR_PANEL - NORTH AMERICA	46	46	A=0.93478262	C=0.06521739	A/A=0.86956519 A/C=0.13043478	Pr(chiSq=0.014,df=1) =1.000	Genotype Freq.
AFD_CHN_PANEL - NORTH AMERICA	48	48	C=0.62500000	A=0.37500000	C/C=0.41666666 A/C=0.41666666 A/A=0.16666667	Pr(chiSq=0.296,df=1) =0.655	Genotype Freq.

Submitted individual genotype for ss24385598

There is no individual genotype data for ss24385598.

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