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Submitted SNP(ss) Details: ss2758638878           
Submitter
HandleGNOMAD
Submitter SNP IDrs2392039
RefSNP(rs#)rs2392039
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2758638878|allelePos=26|len=51|taxid=9606|alleles='G/A'|mol=Genomic
 GAGCTAAATG TTGCCTTTGT ACCCA
 R
 AAGGTGCATC CAAGTAATGA AGGGA

  Submitted Frequency for ss2758638878 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
MALE17062A=0.68210059
G=0.31789944
gnomad-MALEGNOMAD
FEMALE13790A=0.69528645
G=0.30471355
gnomad-FEMALEGNOMAD
EAS1604G=0.63778055
A=0.36221945
gnomad-EASGNOMAD
AFR8682A=0.70836210
G=0.29163787
gnomad-AFRGNOMAD
OTH974A=0.66940451
G=0.33059549
gnomad-OTHGNOMAD
NFE14974A=0.70428741
G=0.29571256
gnomad-NFEGNOMAD
AMR830A=0.59036142
G=0.40963855
gnomad-AMRGNOMAD
ASJ300A=0.72333336
G=0.27666667
gnomad-ASJGNOMAD
FIN3488A=0.74254584
G=0.25745413
gnomad-FINGNOMAD


  dbSNP summary of Genotypes for ss2758638878 back to top
No sufficient data to compute Hardy-weinberg probability for ss2758638878.


  Submitted individual genotype for ss2758638878 back to top
There is no individual genotype data for ss2758638878.

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