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    ARL5B ADP ribosylation factor like GTPase 5B [ Sus scrofa (pig) ]

    Gene ID: 100627052, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ARL5Bprovided by VGNC
    Official Full Name
    ADP ribosylation factor like GTPase 5Bprovided by VGNC
    Primary source
    VGNC:VGNC:95985
    See related
    Ensembl:ENSSSCG00000031456
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in lung (RPKM 7.7), spleen (RPKM 7.0) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See ARL5B in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 10 NC_010452.4 (55675129..55700389, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 10 NC_010452.3 (77145924..77172343, complement)

    Chromosome 10 - NC_010452.4Genomic Context describing neighboring genes Neighboring gene plexin domain containing 2 Neighboring gene uncharacterized LOC110255701 Neighboring gene MAM and LDL receptor class A domain containing 1 Neighboring gene coiled-coil domain containing 7 Neighboring gene uncharacterized LOC106505183

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor-like protein 5B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010452.4 Reference Sscrofa11.1 Primary Assembly

      Range
      55675129..55700389 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005668272.3 → XP_005668329.1  ADP-ribosylation factor-like protein 5B

      See identical proteins and their annotated locations for XP_005668329.1

      UniProtKB/TrEMBL
      A0A286ZX20, A0A8D0WLT4, A0A8D1ASX9, A0A8D1RFA2
      Related
      ENSSSCP00000036169.1, ENSSSCT00000066395.2
      Conserved Domains (1) summary
      cd04153
      Location:4 → 176
      Arl5_Arl8; Arf-like 5 (Arl5) and 8 (Arl8) GTPases
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials