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    LOC101156332 NADPH oxidase activator 1 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101156332, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC101156332
    Gene description
    NADPH oxidase activator 1
    See related
    EnsemblRapid:ENSORLG00000017727
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
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    Genomic context

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    See LOC101156332 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 9 NC_019867.2 (31918092..31932477, complement)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 9 NC_019867.1 (32195123..32210205, complement)

    Chromosome 9 - NC_019867.2Genomic Context describing neighboring genes Neighboring gene syntaxin binding protein 1b Neighboring gene whirlin Neighboring gene mannosidase, alpha, class 1B, member 1b Neighboring gene dipeptidyl-peptidase 7 Neighboring gene calcium channel, voltage-dependent, N type, alpha 1B subunit, a Neighboring gene uncharacterized LOC111947941

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables superoxide-generating NADPH oxidase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in superoxide anion generation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NADPH oxidase activator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019867.2 Reference ASM223467v1 Primary Assembly

      Range
      31918092..31932477 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011479755.3 → XP_011478057.2  NADPH oxidase activator 1 isoform X3

      Conserved Domains (3) summary
      cd12047
      Location:412 → 464
      SH3_Noxa1_C; C-terminal Src Homology 3 domain of NADPH oxidase activator 1
      cl02720
      Location:323 → 398
      PB1; The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 ...
      cl17036
      Location:191 → 242
      SH3; Src Homology 3 domain superfamily

    2. XM_020706351.1 → XP_020562010.1  NADPH oxidase activator 1 isoform X2

      Conserved Domains (4) summary
      cd12047
      Location:418 → 470
      SH3_Noxa1_C; C-terminal Src Homology 3 domain of NADPH oxidase activator 1
      sd00006
      Location:36 → 66
      TPR; TPR repeat [structural motif]
      cl02720
      Location:329 → 404
      PB1; The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 ...
      cl17036
      Location:197 → 248
      SH3; Src Homology 3 domain superfamily

    3. XM_020706350.1 → XP_020562009.1  NADPH oxidase activator 1 isoform X1

      Related
      ENSORLP00000052582.1, ENSORLT00000103016.1
      Conserved Domains (4) summary
      cd12047
      Location:457 → 509
      SH3_Noxa1_C; C-terminal Src Homology 3 domain of NADPH oxidase activator 1
      sd00006
      Location:37 → 65
      TPR; TPR repeat [structural motif]
      cl02720
      Location:368 → 443
      PB1; The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 ...
      cl17036
      Location:236 → 287
      SH3; Src Homology 3 domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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