U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Dcn decorin [ Dipodomys ordii (Ord's kangaroo rat) ]

    Gene ID: 105990500, updated on 13-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Dcn
    Gene description
    decorin
    See related
    Ensembl:ENSDORG00000009079
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys ordii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Dcn in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267219.1 (25912689..25940565, complement)

    NW_012267219.1Genomic Context describing neighboring genes Neighboring gene keratocan Neighboring gene lumican Neighboring gene uncharacterized LOC105988973 Neighboring gene BTG anti-proliferation factor 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_012267219.1 Unplaced Scaffold Reference Dord_2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    decorin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Dord_2.0

    Genomic

    1. NW_012267219.1 Reference Dord_2.0

      Range
      25912689..25940565 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013022950.1 → XP_012878404.1  decorin

      See identical proteins and their annotated locations for XP_012878404.1

      UniProtKB/TrEMBL
      A0A1S3FQV8
      Conserved Domains (3) summary
      PRK15370
      Location:40 → 299
      PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
      sd00031
      Location:305 → 318
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:73 → 93
      LRR_RI; leucine-rich repeat [structural motif]

    2. XM_013022955.1 → XP_012878409.1  decorin

      See identical proteins and their annotated locations for XP_012878409.1

      UniProtKB/TrEMBL
      A0A1S3FQV8
      Related
      ENSDORP00000008528.2, ENSDORT00000009080.2
      Conserved Domains (3) summary
      PRK15370
      Location:40 → 299
      PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
      sd00031
      Location:305 → 318
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:73 → 93
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.