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    POMT1 protein O-mannosyltransferase 1 [ Callorhinus ursinus (northern fur seal) ]

    Gene ID: 112836479, updated on 15-Mar-2024

    Summary

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    Gene symbol
    POMT1
    Gene description
    protein O-mannosyltransferase 1
    See related
    EnsemblRapid:ENSCURG00000015989
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callorhinus ursinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
    Orthologs
    human mouse all
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    Genomic context

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    See POMT1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312928.1 (1331455..1348255, complement)

    NW_020312928.1Genomic Context describing neighboring genes Neighboring gene Rap guanine nucleotide exchange factor 1 Neighboring gene proline rich transmembrane protein 1B Neighboring gene uridine-cytidine kinase 1 Neighboring gene small nucleolar RNA SNORD62 Neighboring gene small nucleolar RNA SNORD62 Neighboring gene proline rich coiled-coil 2B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020312928 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein O-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein O-mannosyl-transferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM326570v1 Primary Assembly

    Genomic

    1. NW_020312928.1 Reference ASM326570v1 Primary Assembly

      Range
      1331455..1348255 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025888258.1 → XP_025744043.1  protein O-mannosyl-transferase 1 isoform X2

      UniProtKB/TrEMBL
      A0A3Q7QEB3
      Conserved Domains (1) summary
      COG1928
      Location:14 → 676
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

    2. XM_025888253.1 → XP_025744038.1  protein O-mannosyl-transferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q7RTU5
      Conserved Domains (1) summary
      COG1928
      Location:14 → 720
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

    3. XM_025888262.1 → XP_025744047.1  protein O-mannosyl-transferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q7RTU5
      Conserved Domains (1) summary
      COG1928
      Location:14 → 720
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

    4. XM_025888255.1 → XP_025744040.1  protein O-mannosyl-transferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q7RTU5
      Related
      ENSCURP00000026039.1, ENSCURT00000029869.1
      Conserved Domains (1) summary
      COG1928
      Location:14 → 720
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

    5. XM_025888256.1 → XP_025744041.1  protein O-mannosyl-transferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q7RTU5
      Conserved Domains (1) summary
      COG1928
      Location:14 → 720
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

    6. XM_025888254.1 → XP_025744039.1  protein O-mannosyl-transferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q7RTU5
      Conserved Domains (1) summary
      COG1928
      Location:14 → 720
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

    7. XM_025888260.1 → XP_025744045.1  protein O-mannosyl-transferase 1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q7QBH8
      Conserved Domains (1) summary
      COG1928
      Location:2 → 603
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

    8. XM_025888261.1 → XP_025744046.1  protein O-mannosyl-transferase 1 isoform X5

      UniProtKB/TrEMBL
      A0A3Q7RTV2
      Conserved Domains (1) summary
      COG1928
      Location:14 → 560
      PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

    9. XM_025888259.1 → XP_025744044.1  protein O-mannosyl-transferase 1 isoform X3

      UniProtKB/TrEMBL
      A0A3Q7QE45
      Conserved Domains (2) summary
      pfam02366
      Location:20 → 267
      PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
      pfam02815
      Location:310 → 390
      MIR; MIR domain

    RNA

    1. XR_003211498.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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