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    arhgap25 Rho GTPase activating protein 25 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 448347, updated on 5-Mar-2024

    Summary

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    Official Symbol
    arhgap25provided by Xenbase
    Official Full Name
    Rho GTPase activating protein 25provided by Xenbase
    Primary source
    Xenbase:XB-GENE-1002911
    See related
    Ensembl:ENSXETG00000008195
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    arhgap24
    Orthologs
    human mouse all
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    Genomic context

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    See arhgap25 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (122924670..122970152, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (111261987..111305046)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene gastrokine-1-like Neighboring gene bone morphogenetic protein 10 Neighboring gene CDP-diacylglycerol synthase 2 Neighboring gene proliferating cell nuclear antigen

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC89193

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    rho GTPase-activating protein 25

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006709.1 → NP_001006710.1  rho GTPase-activating protein 25

      See identical proteins and their annotated locations for NP_001006710.1

      Status: PROVISIONAL

      Source sequence(s)
      BC075428
      UniProtKB/TrEMBL
      F6RSY4, Q6DIV7
      Related
      ENSXETP00000017966.5, ENSXETT00000017966.5
      Conserved Domains (2) summary
      cd04390
      Location:158 → 356
      RhoGAP_ARHGAP22_24_25; GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP22, 24 and 25-like proteins; longer isoforms of these proteins contain an additional N-terminal pleckstrin homology (PH) domain. ARHGAP25 (KIA0053) has been identified as a GAP for ...
      cd13263
      Location:45 → 159
      PH_RhoGap25-like; Rho GTPase activating protein 25 and related proteins Pleckstrin homology (PH) domain

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      122924670..122970152 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031897824.1 → XP_031753684.1  rho GTPase-activating protein 25 isoform X1

      UniProtKB/TrEMBL
      A0A8J1J740
      Conserved Domains (2) summary
      cd04390
      Location:38 → 236
      RhoGAP_ARHGAP22_24_25; GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP22, 24 and 25-like proteins; longer isoforms of these proteins contain an additional N-terminal pleckstrin homology (PH) domain. ARHGAP25 (KIA0053) has been identified as a GAP for ...
      cl17171
      Location:1 → 39
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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