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    sfxn1 sideroflexin 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 548998, updated on 5-Mar-2024

    Summary

    Official Symbol
    sfxn1provided by Xenbase
    Official Full Name
    sideroflexin 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-970145
    See related
    Ensembl:ENSXETG00000035035
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    sfxn3
    Orthologs
    NEW
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    Genomic context

    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (42131952..42144431, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (32666369..32678443)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene endoplasmic reticulum-golgi intermediate compartment 1 Neighboring gene toll-like receptor 22 Neighboring gene dopamine receptor D1 Neighboring gene uncharacterized LOC116409479

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables monoatomic ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    sideroflexin-1
    Names
    sideroflexin 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001016244.2NP_001016244.1  sideroflexin-1

      See identical proteins and their annotated locations for NP_001016244.1

      Status: PROVISIONAL

      Source sequence(s)
      CR761782
      UniProtKB/TrEMBL
      A0A6I8QEV9, A0A6I8R1I8, Q28FS9
      Related
      ENSXETP00000078371.2, ENSXETT00000097375.2
      Conserved Domains (1) summary
      pfam03820
      Location:16322
      Mtc; Tricarboxylate carrier

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      42131952..42144431 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)