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    LOC5513279 uncharacterized LOC5513279 [ Nematostella vectensis (starlet sea anemone) ]

    Gene ID: 5513279, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC5513279
    Gene description
    uncharacterized LOC5513279
    Locus tag
    NEMVEDRAFT_v1g206625
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nematostella vectensis
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current jaNemVect1.1 (GCF_932526225.1) 3 NC_064036.1 (10088889..10100579)
    100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834343.1 (887671..899648)

    Chromosome 3 - NC_064036.1Genomic Context describing neighboring genes Neighboring gene vitamin K-dependent gamma-carboxylase Neighboring gene protogenin Neighboring gene uncharacterized LOC125561258 Neighboring gene uncharacterized LOC116618697 Neighboring gene uncharacterized LOC5513280 Neighboring gene paired amphipathic helix protein Sin3a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC5513279
    Names
    predicted protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference jaNemVect1.1

    Genomic

    1. NC_064036.1 Reference jaNemVect1.1

      Range
      10088889..10100579
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001633469.3 → XP_001633519.1  uncharacterized protein LOC5513279

      See identical proteins and their annotated locations for XP_001633519.1

      UniProtKB/TrEMBL
      A7S4D6
      Conserved Domains (1) summary
      pfam04103
      Location:21 → 179
      CD20; CD20-like family

    2. XM_048725172.1 → XP_048581129.1  uncharacterized protein LOC5513279

      UniProtKB/TrEMBL
      A7S4D6
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases