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CCDC86 coiled-coil domain containing 86 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100476262, updated on 8-Mar-2024

Summary

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Gene symbol
CCDC86
Gene description
coiled-coil domain containing 86
Locus tag
PANDA_018728
See related
Ensembl:ENSAMEG00000007330
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 16 NC_048233.1 (80640636..80646964)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218849.1 (107957..115699)

Chromosome 16 - NC_048233.1Genomic Context describing neighboring genes Neighboring gene membrane spanning 4-domains A15 Neighboring gene membrane spanning 4-domains A10 Neighboring gene prostaglandin D2 receptor 2 Neighboring gene uncharacterized LOC117796659 Neighboring gene zona pellucida glycoprotein 1 Neighboring gene pre-mRNA processing factor 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 86

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048233.1 Reference ASM200744v2 Primary Assembly

    Range
    80640636..80646964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002928649.4 → XP_002928695.1  coiled-coil domain-containing protein 86

    See identical proteins and their annotated locations for XP_002928695.1

    UniProtKB/TrEMBL
    D2I0J7
    Related
    ENSAMEP00000007710.1, ENSAMET00000008031.2
    Conserved Domains (3) summary
    pfam01044
    Location:14 → 138
    Vinculin; Vinculin family
    pfam03879
    Location:236 → 338
    Cgr1; Cgr1 family
    pfam04929
    Location:136 → 227
    Herpes_DNAp_acc; Herpes DNA replication accessory factor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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