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atad2 ATPase family, AAA domain containing 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100496913, updated on 8-Mar-2024

Summary

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Official Symbol
atad2provided by Xenbase
Official Full Name
ATPase family, AAA domain containing 2provided by Xenbase
Primary source
Xenbase:XB-GENE-995542
See related
Ensembl:ENSXETG00000023215
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
28
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (139800932..139825892, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683417.1 (572922..597820)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 83 member A Neighboring gene zinc fingers and homeoboxes 1 Neighboring gene N-terminal glutamine amidase 1 Neighboring gene F-box protein 32

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ATPase family AAA domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    139800932..139825892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031903490.1 → XP_031759350.1  ATPase family AAA domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A310T8I5, A0A8J1JQP9
    Conserved Domains (3) summary
    cd05528
    Location:980 → 1091
    Bromo_AAA; Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this ...
    COG0464
    Location:441 → 928
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    cd19517
    Location:423 → 592
    RecA-like_Yta7-like; ATPase domain of Saccharomyces cerevisiae Yta7 and similar ATPase domains

  2. XM_012965173.3 → XP_012820627.1  ATPase family AAA domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A310T8I5, A0A6I8RDE6
    Related
    ENSXETP00000079817.2, ENSXETT00000069775.2
    Conserved Domains (3) summary
    cd05528
    Location:981 → 1092
    Bromo_AAA; Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this ...
    CHL00195
    Location:709 → 929
    ycf46; Ycf46; Provisional
    TIGR01243
    Location:420 → 692
    CDC48; AAA family ATPase, CDC48 subfamily
Nucleotide Protein Strain
Heading Accession and Version

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