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TMPRSS13 transmembrane serine protease 13 [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101676584, updated on 8-Mar-2024

Summary

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Gene symbol
TMPRSS13
Gene description
transmembrane serine protease 13
See related
Ensembl:ENSMPUG00000004419
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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See TMPRSS13 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421389.1 (21376787..21405582)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569168.1 (6860024..6888822, complement)

NW_025421389.1Genomic Context describing neighboring genes Neighboring gene small integral membrane protein 35 Neighboring gene interleukin 10 receptor subunit alpha Neighboring gene FXYD domain containing ion transport regulator 6 Neighboring gene FXYD domain containing ion transport regulator 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protease serine 13
Names
transmembrane protease, serine 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421389.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    21376787..21405582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013054908.2 → XP_012910362.1  transmembrane protease serine 13 isoform X1

    UniProtKB/TrEMBL
    A0A8U0V3P7, M3XZ85
    Conserved Domains (3) summary
    smart00020
    Location:325 → 554
    Tryp_SPc; Trypsin-like serine protease
    PHA03378
    Location:34 → 128
    PHA03378; EBNA-3B; Provisional
    pfam15494
    Location:231 → 320
    SRCR_2; Scavenger receptor cysteine-rich domain

  2. XM_045080481.1 → XP_044936416.1  transmembrane protease serine 13 isoform X1

    UniProtKB/TrEMBL
    A0A8U0V3P7, M3XZ85
    Conserved Domains (3) summary
    smart00020
    Location:325 → 554
    Tryp_SPc; Trypsin-like serine protease
    PHA03378
    Location:34 → 128
    PHA03378; EBNA-3B; Provisional
    pfam15494
    Location:231 → 320
    SRCR_2; Scavenger receptor cysteine-rich domain

  3. XM_045080482.1 → XP_044936417.1  transmembrane protease serine 13 isoform X2

    UniProtKB/TrEMBL
    A0A8U0S5R5, M3XZ85
    Conserved Domains (3) summary
    smart00020
    Location:312 → 541
    Tryp_SPc; Trypsin-like serine protease
    smart00202
    Location:232 → 302
    SR; Scavenger receptor Cys-rich
    PHA03378
    Location:34 → 128
    PHA03378; EBNA-3B; Provisional

  4. XM_013054909.2 → XP_012910363.1  transmembrane protease serine 13 isoform X3

    UniProtKB/TrEMBL
    A0A8U0TCE9, M3XZ85
    Conserved Domains (3) summary
    smart00020
    Location:293 → 522
    Tryp_SPc; Trypsin-like serine protease
    cd00190
    Location:294 → 525
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam15494
    Location:199 → 288
    SRCR_2; Scavenger receptor cysteine-rich domain
Nucleotide Protein
Heading Accession and Version

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