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Lrrc37 leucine rich repeat containing 37 [ Mus musculus (house mouse) ]

Gene ID: 380730, updated on 8-Feb-2024

Summary

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Official Symbol
Lrrc37provided by MGI
Official Full Name
leucine rich repeat containing 37provided by MGI
Primary source
MGI:MGI:2685730
See related
Ensembl:ENSMUSG00000034239 AllianceGenome:MGI:2685730
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm884
Expression
Restricted expression toward testis adult (RPKM 7.9) See more
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Genomic context

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See Lrrc37 in Genome Data Viewer
Location:
11 E1; 11 67.38 cM
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (103425403..103512309, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (103534577..103621483, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9376 Neighboring gene STARR-positive B cell enhancer ABC_E3027 Neighboring gene predicted gene, 39397 Neighboring gene STARR-seq mESC enhancer starr_30849 Neighboring gene STARR-seq mESC enhancer starr_30850 Neighboring gene leucine rich repeat containing 37A Neighboring gene STARR-seq mESC enhancer starr_30851 Neighboring gene STARR-seq mESC enhancer starr_30852 Neighboring gene STARR-seq mESC enhancer starr_30853 Neighboring gene STARR-seq mESC enhancer starr_30854 Neighboring gene STARR-seq mESC enhancer starr_30855 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene RIKEN cDNA 1700072I22 gene Neighboring gene lysozyme-like 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Evolutionary dynamism of the primate LRRC37 gene family. Giannuzzi G, et al. Genome Res, 2013 Jan. PMID 23064749, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
leucine-rich repeat-containing protein 37A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033434.2 → NP_001028606.2  leucine-rich repeat-containing protein 37A

    Status: VALIDATED

    Source sequence(s)
    AK029868, AL732606
    Consensus CDS
    CCDS48952.1
    UniProtKB/TrEMBL
    E9Q472, Q3V3Y5
    Related
    ENSMUSP00000129662.2, ENSMUST00000167262.2
    Conserved Domains (5) summary
    sd00031
    Location:600 → 623
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:578 → 599
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:601 → 658
    LRR_8; Leucine rich repeat
    pfam14914
    Location:1248 → 1394
    LRRC37AB_C; LRRC37A/B like protein 1 C-terminal domain
    pfam15779
    Location:67 → 131
    LRRC37; Leucine-rich repeat-containing protein 37 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    103425403..103512309 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030246104.1 → XP_030101964.1  leucine-rich repeat-containing protein 37A isoform X1

    UniProtKB/TrEMBL
    A2A9H6
    Related
    ENSMUSP00000058511.7, ENSMUST00000059279.13
    Conserved Domains (5) summary
    sd00031
    Location:2858 → 2881
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:2836 → 2857
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:2859 → 2916
    LRR_8; Leucine rich repeat
    pfam14914
    Location:3506 → 3652
    LRRC37AB_C; LRRC37A/B like protein 1 C-terminal domain
    pfam15779
    Location:1115 → 1187
    LRRC37; Leucine-rich repeat-containing protein 37 family
Nucleotide Protein Strain
Heading Accession and Version

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