CMYA5 cardiomyopathy associated 5 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: CMYA5provided by VGNC
Official Full Name: cardiomyopathy associated 5provided by VGNC
Primary source: VGNC:VGNC:39387
See related: Ensembl:ENSCAFG00845006378
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	3	NC_051807.1 (27100289..27189719, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	3	NC_006585.4 (28421194..28510581, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	3	NC_049224.1 (27297689..27387079, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	3	NC_049263.1 (27040244..27129617, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	3	NC_049744.1 (27017022..27106429, complement)

Chromosome 3 - NC_051807.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: cardiomyopathy-associated protein 5; LOW QUALITY PROTEIN: cardiomyopathy-associated protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051807.1 Reference ROS_Cfam_1.0

Range

27100289..27189719 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038660527.1 → XP_038516455.1 cardiomyopathy-associated protein 5

UniProtKB/TrEMBL

A0A8C0Q084

Related

ENSCAFP00845008903.1, ENSCAFT00845011397.1

Conserved Domains (4) summary

PTZ00121
Location:1904 → 2544

PTZ00121; MAEBL; Provisional

COG1196
Location:3305 → 3502

Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

cd00063
Location:3542 → 3639

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cl02614
Location:3734 → 3896

SPRY; SPRY domain

Alternate UMICH_Zoey_3.1

Genomic

NC_049263.1 Alternate UMICH_Zoey_3.1

Range

27040244..27129617 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038472699.1 → XP_038328627.1 LOW QUALITY PROTEIN: cardiomyopathy-associated protein 5

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049744.1 Alternate UNSW_CanFamBas_1.0

Range

27017022..27106429 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038596388.1 → XP_038452316.1 cardiomyopathy-associated protein 5

Conserved Domains (4) summary

PTZ00121
Location:1904 → 2544

PTZ00121; MAEBL; Provisional

COG1196
Location:3305 → 3502

Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

cd00063
Location:3542 → 3639

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cl02614
Location:3734 → 3896

SPRY; SPRY domain

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049224.1 Alternate UU_Cfam_GSD_1.0

Range

27297689..27387079 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038532132.1 → XP_038388060.1 cardiomyopathy-associated protein 5

UniProtKB/TrEMBL

A0A8C0NT02, A0A8C0Q084

Conserved Domains (4) summary

PTZ00121
Location:1904 → 2544

PTZ00121; MAEBL; Provisional

COG1196
Location:3305 → 3502

Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

cd00063
Location:3542 → 3639

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cl02614
Location:3734 → 3896

SPRY; SPRY domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

28421194..28510581 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_536312.5 → XP_536312.4 cardiomyopathy-associated protein 5

UniProtKB/TrEMBL

A0A8C0NT02, A0A8C0Q084

Conserved Domains (4) summary

PTZ00121
Location:1904 → 2544

PTZ00121; MAEBL; Provisional

COG1196
Location:3305 → 3502

Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

cd00063
Location:3542 → 3639

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cl02614
Location:3734 → 3896

SPRY; SPRY domain