LRRC58 leucine rich repeat containing 58 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: LRRC58provided by VGNC
Official Full Name: leucine rich repeat containing 58provided by VGNC
Primary source: VGNC:VGNC:56127
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 33

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	33	NC_051837.1 (24081600..24101985, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	33	NC_006615.4 (23871217..23891596, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	33	NC_049254.1 (24486998..24507383, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	33	NC_049293.1 (23882593..23902964, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	33	NC_049774.1 (23923410..23943761, complement)

Chromosome 33 - NC_051837.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: leucine-rich repeat-containing protein 58

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051837.1 Reference ROS_Cfam_1.0

Range

24081600..24101985 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038445075.1 → XP_038301003.1 leucine-rich repeat-containing protein 58

Conserved Domains (2) summary

COG4886
Location:62 → 242

LRR; Leucine-rich repeat (LRR) protein [Transcription]

sd00033
Location:65 → 87

LRR_RI; leucine-rich repeat [structural motif]

Alternate UMICH_Zoey_3.1

Genomic

NC_049293.1 Alternate UMICH_Zoey_3.1

Range

23882593..23902964 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038519336.1 → XP_038375264.1 leucine-rich repeat-containing protein 58

Conserved Domains (2) summary

COG4886
Location:62 → 242

LRR; Leucine-rich repeat (LRR) protein [Transcription]

sd00033
Location:65 → 87

LRR_RI; leucine-rich repeat [structural motif]

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049774.1 Alternate UNSW_CanFamBas_1.0

Range

23923410..23943761 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038647345.1 → XP_038503273.1 leucine-rich repeat-containing protein 58

Conserved Domains (2) summary

COG4886
Location:62 → 242

LRR; Leucine-rich repeat (LRR) protein [Transcription]

sd00033
Location:65 → 87

LRR_RI; leucine-rich repeat [structural motif]

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049254.1 Alternate UU_Cfam_GSD_1.0

Range

24486998..24507383 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038582958.1 → XP_038438886.1 leucine-rich repeat-containing protein 58

Conserved Domains (2) summary

COG4886
Location:62 → 242

LRR; Leucine-rich repeat (LRR) protein [Transcription]

sd00033
Location:65 → 87

LRR_RI; leucine-rich repeat [structural motif]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006615.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

23871217..23891596 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_545123.6 → XP_545123.4 leucine-rich repeat-containing protein 58

Conserved Domains (2) summary

COG4886
Location:62 → 242

LRR; Leucine-rich repeat (LRR) protein [Transcription]

sd00033
Location:65 → 87

LRR_RI; leucine-rich repeat [structural motif]