Format

Send to:

Choose Destination

SDS serine dehydratase [ Bos taurus (cattle) ]

Gene ID: 514346, updated on 25-Nov-2021

Summary

Official Symbol
SDSprovided by VGNC
Official Full Name
serine dehydrataseprovided by VGNC
Primary source
VGNC:VGNC:34399
See related
BGD:BT10319; Ensembl:ENSBTAG00000031814
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See SDS in Genome Data Viewer
Location:
chromosome: 17
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 17 NC_037344.1 (61030532..61038866)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 17 AC_000174.1 (63302877..63311105)

Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene serine dehydratase like Neighboring gene phospholipase B domain containing 2 Neighboring gene uncharacterized LOC104974667

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Clone Names

  • MGC139659

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables L-serine ammonia-lyase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein homodimerization activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables pyridoxal phosphate binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in L-serine catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in pyruvate biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
L-serine dehydratase/L-threonine deaminase
Names
L-serine deaminase
L-threonine dehydratase
SDH
TDH
NP_001069130.1
XP_024832979.1
XP_024832980.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075662.1NP_001069130.1  L-serine dehydratase/L-threonine deaminase

    See identical proteins and their annotated locations for NP_001069130.1

    Status: PROVISIONAL

    Source sequence(s)
    BC119966
    UniProtKB/Swiss-Prot
    Q0VCW4
    Conserved Domains (2) summary
    cd06448
    Location:10320
    L-Ser-dehyd; Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
    pfam00291
    Location:11304
    PALP; Pyridoxal-phosphate dependent enzyme

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037344.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    61030532..61038866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024977211.1XP_024832979.1  L-serine dehydratase/L-threonine deaminase isoform X1

    Related
    ENSBTAP00000058649.1, ENSBTAT00000081738.1
    Conserved Domains (1) summary
    cd06448
    Location:70380
    L-Ser-dehyd; Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
  2. XM_024977212.1XP_024832980.1  L-serine dehydratase/L-threonine deaminase isoform X2

    Conserved Domains (1) summary
    cd06448
    Location:10320
    L-Ser-dehyd; Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Support Center