SDS serine dehydratase [Bos taurus (cattle)] - Gene

Summary

Official Symbol: SDSprovided by VGNC
Official Full Name: serine dehydrataseprovided by VGNC
Primary source: VGNC:VGNC:34399
See related: BGD:BT10319; Ensembl:ENSBTAG00000031814
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	17	NC_037344.1 (61030670..61038845)

Chromosome 17 - NC_037344.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

MARC_2113-2114:1031693710:1 (e-PCR)
- UniSTS:268486

MARC_2115-2116:966880825:1 (e-PCR)
- UniSTS:268493

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables L-serine ammonia-lyase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables pyridoxal phosphate binding	IEA Inferred from Electronic Annotation more info	PubMed
enables threonine deaminase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in L-serine catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in threonine catabolic process	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: L-serine dehydratase/L-threonine deaminase

Names: L-serine deaminase; L-threonine dehydratase; SDH; TDH

NP_001069130.1

EC 4.3.1.17

EC 4.3.1.19

XP_024832980.1

EC 4.3.1.17

EC 4.3.1.19

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001075662.1 → NP_001069130.1 L-serine dehydratase/L-threonine deaminase

See identical proteins and their annotated locations for NP_001069130.1

Status: PROVISIONAL

Source sequence(s)

BC119966

UniProtKB/Swiss-Prot

Q0VCW4

UniProtKB/TrEMBL

A0A3Q1LTZ6

Related

ENSBTAP00000058649.2, ENSBTAT00000081738.2

Conserved Domains (2) summary

cd06448
Location:10 → 320

L-Ser-dehyd; Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.

pfam00291
Location:11 → 304

PALP; Pyridoxal-phosphate dependent enzyme

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

Range

61030670..61038845

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_024977212.2 → XP_024832980.1 L-serine dehydratase/L-threonine deaminase isoform X1

UniProtKB/TrEMBL

A0A3Q1LTZ6

Conserved Domains (1) summary

cd06448
Location:10 → 320

L-Ser-dehyd; Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.