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CLEC2B C-type lectin domain family 2 member B [ Canis lupus familiaris (dog) ]

Gene ID: 611423, updated on 5-Mar-2024

Summary

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Official Symbol
CLEC2Bprovided by VGNC
Official Full Name
C-type lectin domain family 2 member Bprovided by VGNC
Primary source
VGNC:VGNC:49757
See related
Ensembl:ENSCAFG00845027681
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human all
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Genomic context

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See CLEC2B in Genome Data Viewer
Location:
chromosome: 27
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (36437196..36492246)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (10477021..10532945, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (10000345..10055174, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (36324121..36380194)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (36348089..36403238)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 12 member A Neighboring gene C-type lectin domain family 2 member F-like Neighboring gene killer cell lectin like receptor F1 Neighboring gene CD69 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 2 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    36437196..36492246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038439040.1 → XP_038294968.1  C-type lectin domain family 2 member B isoform X1

    Conserved Domains (1) summary
    cd03593
    Location:81 → 192
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_038439039.1 → XP_038294967.1  C-type lectin domain family 2 member B isoform X1

    Conserved Domains (1) summary
    cd03593
    Location:81 → 192
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_038439041.1 → XP_038294969.1  C-type lectin domain family 2 member B isoform X2

    UniProtKB/TrEMBL
    A0A8C0PCV9, A0A8I3Q3A1
    Related
    ENSCAFP00845038299.1, ENSCAFT00845048814.1
    Conserved Domains (1) summary
    cd03593
    Location:72 → 183
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  4. XM_038439043.1 → XP_038294971.1  C-type lectin domain family 2 member B isoform X3

    UniProtKB/TrEMBL
    A0A8C0JX59
    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  5. XM_038439042.1 → XP_038294970.1  C-type lectin domain family 2 member B isoform X3

    UniProtKB/TrEMBL
    A0A8C0JX59
    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    36324121..36380194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038513694.1 → XP_038369622.1  C-type lectin domain family 2 member B isoform X1

    Conserved Domains (1) summary
    cd03593
    Location:81 → 192
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_038513693.1 → XP_038369621.1  C-type lectin domain family 2 member B isoform X1

    Conserved Domains (1) summary
    cd03593
    Location:81 → 192
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_038513695.1 → XP_038369623.1  C-type lectin domain family 2 member B isoform X2

  4. XM_038513697.1 → XP_038369625.1  C-type lectin domain family 2 member B isoform X3

    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  5. XM_038513696.1 → XP_038369624.1  C-type lectin domain family 2 member B isoform X3

    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    36348089..36403238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038641523.1 → XP_038497451.1  C-type lectin domain family 2 member B isoform X1

    Conserved Domains (1) summary
    cd03593
    Location:81 → 192
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_038641522.1 → XP_038497450.1  C-type lectin domain family 2 member B isoform X1

    Conserved Domains (1) summary
    cd03593
    Location:81 → 192
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_038641524.1 → XP_038497452.1  C-type lectin domain family 2 member B isoform X2

  4. XM_038641526.1 → XP_038497454.1  C-type lectin domain family 2 member B isoform X3

    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  5. XM_038641525.1 → XP_038497453.1  C-type lectin domain family 2 member B isoform X3

    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    10000345..10055174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038576756.1 → XP_038432684.1  C-type lectin domain family 2 member B isoform X1

  2. XM_038576757.1 → XP_038432685.1  C-type lectin domain family 2 member B isoform X1

  3. XM_038576758.1 → XP_038432686.1  C-type lectin domain family 2 member B isoform X2

  4. XM_038576760.1 → XP_038432688.1  C-type lectin domain family 2 member B isoform X3

  5. XM_038576759.1 → XP_038432687.1  C-type lectin domain family 2 member B isoform X3

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    10477021..10532945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022411331.2 → XP_022267039.1  C-type lectin domain family 2 member B isoform X1

    Conserved Domains (1) summary
    cd03593
    Location:81 → 192
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_038459803.1 → XP_038315731.1  C-type lectin domain family 2 member B isoform X1

    Conserved Domains (1) summary
    cd03593
    Location:81 → 192
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_014108351.3 → XP_013963826.1  C-type lectin domain family 2 member B isoform X2

    UniProtKB/TrEMBL
    A0A8C0SKD3, A0A8P0SRP0
    Conserved Domains (1) summary
    cd03593
    Location:72 → 183
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  4. XM_038459805.1 → XP_038315733.1  C-type lectin domain family 2 member B isoform X3

    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  5. XM_038459804.1 → XP_038315732.1  C-type lectin domain family 2 member B isoform X3

    Conserved Domains (1) summary
    cd03593
    Location:63 → 174
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
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