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    Zfp825 zinc finger protein 825 [ Mus musculus (house mouse) ]

    Gene ID: 235956, updated on 23-Jun-2021

    Summary

    Official Symbol
    Zfp825provided by MGI
    Official Full Name
    zinc finger protein 825provided by MGI
    Primary source
    MGI:MGI:2385315
    See related
    Ensembl:ENSMUSG00000069208
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Ubiquitous expression in bladder adult (RPKM 1.2), CNS E11.5 (RPKM 1.1) and 24 other tissues See more
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    Genomic context

    See Zfp825 in Genome Data Viewer
    Location:
    13; 13 C1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (74626497..74642132, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (74478378..74494012, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (74617505..74631398, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41004 Neighboring gene RIKEN cDNA E430024I08 gene Neighboring gene zinc finger protein 431-like Neighboring gene upstream binding transcription factor, RNA polymerase I pseudogene Neighboring gene stomatin (Epb7.2)-like 2 pseudogene Neighboring gene zinc finger protein 431-like Neighboring gene uncharacterized LOC118568073

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001374752.1NP_001361681.1  zinc finger protein 124 isoform 1

      Status: VALIDATED

      Source sequence(s)
      CT009718
      Consensus CDS
      CCDS88485.1
      Conserved Domains (3) summary
      COG5048
      Location:119271
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:207227
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:2262
      KRAB; KRAB box
    2. NM_001377115.1NP_001364044.1  zinc finger protein 124 isoform 1

      Status: VALIDATED

      Source sequence(s)
      CT009718
      Related
      ENSMUSP00000152719.2, ENSMUST00000221173.2
      Conserved Domains (3) summary
      COG5048
      Location:119271
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:207227
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:2262
      KRAB; KRAB box
    3. NM_146231.2NP_666343.1  zinc finger protein 124 isoform 2

      See identical proteins and their annotated locations for NP_666343.1

      Status: VALIDATED

      Source sequence(s)
      CT009718
      Consensus CDS
      CCDS79212.1
      UniProtKB/TrEMBL
      Q91VL6
      Related
      ENSMUSP00000144128.2, ENSMUST00000202645.4
      Conserved Domains (3) summary
      COG5048
      Location:101253
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:189209
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:444
      KRAB; KRAB box

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      74626497..74642132 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030247254.2XP_030103114.1  zinc finger protein 124 isoform X1

      Related
      ENSMUSP00000073973.7, ENSMUST00000074369.7
      Conserved Domains (2) summary
      COG5048
      Location:69221
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:157177
      ZF_C2H2; C2H2 Zn finger [structural motif]
    2. XM_036158036.1XP_036013929.1  zinc finger protein 124 isoform X1

      Conserved Domains (2) summary
      COG5048
      Location:69221
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:157177
      ZF_C2H2; C2H2 Zn finger [structural motif]
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