U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SLC6A11 solute carrier family 6 member 11 [ Canis lupus familiaris (dog) ]

    Gene ID: 476534, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SLC6A11provided by VGNC
    Official Full Name
    solute carrier family 6 member 11provided by VGNC
    Primary source
    VGNC:VGNC:46454
    See related
    Ensembl:ENSCAFG00845006781
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SLC6A11 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (7461064..7589938, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (7466514..7595315, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (7505503..7630735, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (7177316..7306087, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (7533511..7658605, complement)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111091425 Neighboring gene uncharacterized LOC119864633 Neighboring gene solute carrier family 6 member 1 Neighboring gene uncharacterized LOC111091239 Neighboring gene uncharacterized LOC111091426 Neighboring gene uncharacterized LOC102152229 Neighboring gene ATPase plasma membrane Ca2+ transporting 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables gamma-aminobutyric acid:sodium:chloride symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neurotransmitter transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    sodium- and chloride-dependent GABA transporter 3
    Names
    solute carrier family 6 (neurotransmitter transporter, GABA), member 11

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      7461064..7589938 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038426925.1 → XP_038282853.1  sodium- and chloride-dependent GABA transporter 3

      UniProtKB/TrEMBL
      A0A8C0K4A2, A0A8C0MDK3, A0A8I3NFH9, A0A8I3RV00, A0A8P0TG09
      Related
      ENSCAFP00845009407.1, ENSCAFT00845012052.1
      Conserved Domains (1) summary
      cd11508
      Location:47 → 588
      SLC6sbd_GAT3; Na(+)- and Cl(-)-dependent GABA transporter 3; solute-binding domain

    RNA

    1. XR_005297614.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      7177316..7306087 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038502719.1 → XP_038358647.1  sodium- and chloride-dependent GABA transporter 3

      Conserved Domains (1) summary
      cd11508
      Location:47 → 588
      SLC6sbd_GAT3; Na(+)- and Cl(-)-dependent GABA transporter 3; solute-binding domain

    RNA

    1. XR_005340828.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      7533511..7658605 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038629773.1 → XP_038485701.1  sodium- and chloride-dependent GABA transporter 3

      Conserved Domains (1) summary
      cd11508
      Location:47 → 588
      SLC6sbd_GAT3; Na(+)- and Cl(-)-dependent GABA transporter 3; solute-binding domain

    RNA

    1. XR_005408594.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      7505503..7630735 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038565638.1 → XP_038421566.1  sodium- and chloride-dependent GABA transporter 3

      UniProtKB/TrEMBL
      A0A8C0K4A2, A0A8C0MDK3, A0A8I3NFH9, A0A8I3RV00, A0A8P0TG09
      Conserved Domains (1) summary
      cd11508
      Location:47 → 588
      SLC6sbd_GAT3; Na(+)- and Cl(-)-dependent GABA transporter 3; solute-binding domain

    RNA

    1. XR_005374600.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      7466514..7595315 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_533741.7 → XP_533741.2  sodium- and chloride-dependent GABA transporter 3

      UniProtKB/TrEMBL
      A0A8C0K4A2, A0A8C0MDK3, A0A8I3NFH9, A0A8I3RV00, A0A8P0TG09
      Conserved Domains (1) summary
      cd11508
      Location:47 → 588
      SLC6sbd_GAT3; Na(+)- and Cl(-)-dependent GABA transporter 3; solute-binding domain

    RNA

    1. XR_005312715.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.