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    CFAP43 cilia and flagella associated protein 43 [ Gallus gallus (chicken) ]

    Gene ID: 423879, updated on 3-Apr-2024

    Summary

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    Symbol
    CFAP43provided by CGNC
    Full Name
    cilia and flagella associated protein 43provided by CGNC
    Primary source
    CGNC:52071
    See related
    Ensembl:ENSGALG00010021352
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    WDR96
    Orthologs
    human mouse all
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    Genomic context

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    See CFAP43 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (24985124..25027700, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (24877520..24921858, complement)

    Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene STN1, CST complex subunit Neighboring gene STE20 like kinase Neighboring gene collagen type XVII alpha 1 chain Neighboring gene SWI5 dependent homologous recombination repair protein 1 Neighboring gene glutathione S-transferase omega 2 Neighboring gene inositol 1,4,5-trisphosphate receptor interacting protein Neighboring gene cilia and flagella associated protein 58

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sperm axoneme assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cilia- and flagella-associated protein 43
    Names
    WD repeat domain 96

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      24985124..25027700 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015288714.4 → XP_015144200.2  cilia- and flagella-associated protein 43 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZJ93, A0A8V0ZJD1
      Related
      ENSGALP00010030866.1, ENSGALT00010051747.1
      Conserved Domains (5) summary
      pfam05483
      Location:1113 → 1686
      SCP-1; Synaptonemal complex protein 1 (SCP-1)
      COG1196
      Location:959 → 1295
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG2319
      Location:344 → 539
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:341 → 376
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:679 → 767
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_046943328.1 → XP_046799284.1  cilia- and flagella-associated protein 43 isoform X1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      24877520..24921858 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040674110.2 → XP_040530044.1  cilia- and flagella-associated protein 43 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZJD1
      Conserved Domains (4) summary
      pfam05483
      Location:935 → 1508
      SCP-1; Synaptonemal complex protein 1 (SCP-1)
      COG1196
      Location:781 → 1117
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG2319
      Location:177 → 583
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:204 → 241
      7WD40; WD40 repeat [structural motif]

    2. XM_040674109.2 → XP_040530043.1  cilia- and flagella-associated protein 43 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZJD1
      Conserved Domains (4) summary
      pfam05483
      Location:1103 → 1676
      SCP-1; Synaptonemal complex protein 1 (SCP-1)
      COG1196
      Location:949 → 1285
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG2319
      Location:355 → 761
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:382 → 419
      7WD40; WD40 repeat [structural motif]

    3. XM_040674108.2 → XP_040530042.1  cilia- and flagella-associated protein 43 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZJD1
      Conserved Domains (4) summary
      pfam05483
      Location:1113 → 1686
      SCP-1; Synaptonemal complex protein 1 (SCP-1)
      COG1196
      Location:959 → 1295
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      COG2319
      Location:355 → 761
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:382 → 419
      7WD40; WD40 repeat [structural motif]

    4. XM_046920780.1 → XP_046776736.1  cilia- and flagella-associated protein 43 isoform X4

    Nucleotide Protein
    Heading Accession and Version

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