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    CYP4A38 cytochrome P450 4A38 [ Canis lupus familiaris (dog) ]

    Gene ID: 475366, updated on 22-Jan-2024

    Summary

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    Gene symbol
    CYP4A38
    Gene description
    cytochrome P450 4A38
    See related
    Ensembl:ENSCAFG00845017288
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    NEW
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    Genomic context

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    See CYP4A38 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (13789094..13812540)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (13758953..13777892)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (13728034..13746802)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (13590091..13609004)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (13658530..13677292)

    Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 4A6-like Neighboring gene cytochrome P450 4A37 Neighboring gene cytochrome P450, family 4, subfamily A, polypeptide 11 Neighboring gene cytochrome P450 family 4 subfamily B member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning, tissue expression, and regulation of beagle dog CYP4A genes. Graham RA, et al. Toxicol Sci, 2006 Aug. PMID 16675513

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The full-length cDNA sequence for beagle dog CYP4A38 from the liver was determined.
      Title: Cloning, tissue expression, and regulation of beagle dog CYP4A genes.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome P450 4A38

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001048017.1 → NP_001041482.1  cytochrome P450 4A38

      See identical proteins and their annotated locations for NP_001041482.1

      Status: PROVISIONAL

      Source sequence(s)
      DQ138951
      UniProtKB/TrEMBL
      A0A8C0P398, Q2VHZ8
      Related
      ENSCAFP00845024496.1, ENSCAFT00845031294.1
      Conserved Domains (1) summary
      pfam00067
      Location:52 → 504
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051819.1 Reference ROS_Cfam_1.0

      Range
      13789094..13812540
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038687181.1 → XP_038543109.1  cytochrome P450 4A38 isoform X1

      UniProtKB/TrEMBL
      A0A8C0P289
      Conserved Domains (1) summary
      cd20678
      Location:72 → 455
      CYP4B-like; cytochrome P450 family 4, subfamily B and similar cytochrome P450s, including subfamilies A, T, X, and Z

    2. XM_038687182.1 → XP_038543110.1  cytochrome P450 4A38 isoform X2

      UniProtKB/TrEMBL
      A0A8C0P289
      Conserved Domains (1) summary
      cl41757
      Location:72 → 410
      cytochrome_P450; cytochrome P450 (CYP) superfamily

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049275.1 Alternate UMICH_Zoey_3.1

      Range
      13590091..13609004
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

      Range
      13658530..13677292
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

      Range
      13728034..13746802
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      13758953..13777892
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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