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    COPZ1 COPI coat complex subunit zeta 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 607013, updated on 5-Mar-2024

    Summary

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    Official Symbol
    COPZ1provided by VGNC
    Official Full Name
    COPI coat complex subunit zeta 1provided by VGNC
    Primary source
    VGNC:VGNC:111416
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See COPZ1 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (960458..979850, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (45272316..45292137)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (45676211..45695959)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (978807..998914, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (960817..980538, complement)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 385A Neighboring gene G protein-coupled receptor 84 Neighboring gene microRNA mir-148b Neighboring gene uncharacterized LOC119866353 Neighboring gene elongin-C-like Neighboring gene uncharacterized LOC111092795

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COPI vesicle coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coatomer subunit zeta-1; LOW QUALITY PROTEIN: coatomer subunit zeta-1
    Names
    coatomer protein complex subunit zeta 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      960458..979850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038437990.1 → XP_038293918.1  coatomer subunit zeta-1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0TB14
      Conserved Domains (1) summary
      cd14829
      Location:14 → 142
      Zeta-COP; zeta subunit of the F-COPI complex

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      978807..998914 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038512696.1 → XP_038368624.1  LOW QUALITY PROTEIN: coatomer subunit zeta-1 isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      960817..980538 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640447.1 → XP_038496375.1  coatomer subunit zeta-1 isoform X3

      Conserved Domains (1) summary
      cd14829
      Location:14 → 145
      Zeta-COP; zeta subunit of the F-COPI complex

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      45676211..45695959
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577851.1 → XP_038433779.1  coatomer subunit zeta-1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0R4U5, A0A8C0RTX8, A0A8C0TB14
      Conserved Domains (1) summary
      cd14829
      Location:14 → 145
      Zeta-COP; zeta subunit of the F-COPI complex

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      45272316..45292137
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_843171.6 → XP_848264.1  coatomer subunit zeta-1 isoform X5

      See identical proteins and their annotated locations for XP_848264.1

      UniProtKB/TrEMBL
      A0A8C0R4U5, A0A8C0RTX8, A0A8C0TB14
      Conserved Domains (1) summary
      cd14829
      Location:14 → 145
      Zeta-COP; zeta subunit of the F-COPI complex
    Nucleotide Protein
    Heading Accession and Version

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