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    CLEC4F C-type lectin domain family 4 member F [ Canis lupus familiaris (dog) ]

    Gene ID: 481424, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CLEC4Fprovided by VGNC
    Official Full Name
    C-type lectin domain family 4 member Fprovided by VGNC
    Primary source
    VGNC:VGNC:39332
    See related
    Ensembl:ENSCAFG00845028037
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CLEC4F in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (70192860..70202052, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (69057978..69067000, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (70472208..70481400, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (69911411..69920436, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (70172783..70181815, complement)

    Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene adducin 2 Neighboring gene folliculogenesis specific bHLH transcription factor Neighboring gene CD207 molecule Neighboring gene ventral anterior homeobox 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-type lectin domain family 4 member F

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051814.1 Reference ROS_Cfam_1.0

      Range
      70192860..70202052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038678873.1 → XP_038534801.1  C-type lectin domain family 4 member F isoform X1

      UniProtKB/TrEMBL
      A0A8C0QJC4, A0A8C0RPV2, A0A8I3Q482
      Related
      ENSCAFP00845038831.1, ENSCAFT00845049494.1
      Conserved Domains (2) summary
      cd03590
      Location:492 → 616
      CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
      COG1196
      Location:139 → 486
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049270.1 Alternate UMICH_Zoey_3.1

      Range
      69911411..69920436 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038489649.1 → XP_038345577.1  C-type lectin domain family 4 member F isoform X1

    2. XM_038489650.1 → XP_038345578.1  C-type lectin domain family 4 member F isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

      Range
      70172783..70181815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038613497.1 → XP_038469425.1  C-type lectin domain family 4 member F isoform X1

    2. XM_038613498.1 → XP_038469426.1  C-type lectin domain family 4 member F isoform X3

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

      Range
      70472208..70481400 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038549550.1 → XP_038405478.1  C-type lectin domain family 4 member F isoform X1

      UniProtKB/TrEMBL
      A0A8C0QJC4, A0A8C0RPV2, A0A8I3Q482
      Conserved Domains (2) summary
      cd03590
      Location:492 → 616
      CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
      COG1196
      Location:139 → 486
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      69057978..69067000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038641243.1 → XP_038497171.1  C-type lectin domain family 4 member F isoform X1

      UniProtKB/TrEMBL
      A0A8C0QJC4, A0A8C0RPV2, A0A8P0S973
      Conserved Domains (2) summary
      cd03590
      Location:492 → 616
      CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
      COG1196
      Location:191 → 488
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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