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    lvsG BEACH domain-containing protein [ Dictyostelium discoideum AX4 ]

    Gene ID: 8616350, updated on 17-May-2024

    Summary

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    Gene symbol
    lvsG
    Gene description
    BEACH domain-containing protein
    Primary source
    dictyBase:DDB_G0268088
    Locus tag
    DDB_G0268088
    See related
    AmoebaDB:DDB_G0268088; VEuPathDB:DDB_G0268088
    Gene type
    protein coding
    RNA name
    WD40 repeat-containing protein
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium discoideum AX4 (strain: AX4)
    Lineage
    Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
    Old locus tag
    DDBDRAFT_0189768; DDBDRAFT_0231499; DDB_0189768; DDB_0231499
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_007087.3 (1432947..1439629, complement)

    Chromosome 1 - NC_007087.3Genomic Context describing neighboring genes Neighboring gene WD40 repeat-containing protein Neighboring gene hypothetical protein Neighboring gene glycoside hydrolase family 18 protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007087.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by dictyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Names
    BEACH domain-containing protein
    WD40 repeat-containing protein
    kinase motif-containing protein
    XP_647543.1
    • Similar to KMC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007087.3 Reference assembly

      Range
      1432947..1439629 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_642451.1 → XP_647543.1  WD40 repeat-containing protein [Dictyostelium discoideum AX4]

      See identical proteins and their annotated locations for XP_647543.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q55FJ0
      Conserved Domains (6) summary
      cd06071
      Location:475 → 772
      Beach; BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor ...
      COG2319
      Location:1852 → 2177
      WD40; WD40 repeat [General function prediction only]
      sd00044
      Location:1445 → 1472
      HEAT; HEAT repeat [structural motif]
      sd00039
      Location:1870 → 1906
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:1859 → 2177
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl21453
      Location:1299 → 1404
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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