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Sample GSM1273910 Query DataSets for GSM1273910
Status Public on Nov 24, 2014
Title MG-SC (SOD1/miR155-/-)-1
Sample type RNA
 
Source name Mouse -B6/SJL-mSOD1G93A-miR-155-/-
Organism Mus musculus
Characteristics cell type: Spinal FACS sorted adult FCRLS+ microglia
strain/genotype: B6SJL-Tg(SOD1-G93A)1Gur/J (miR-155-/-)
gender: female
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using mirVanaTM miRNA isolation kit (Ambion) according to the manufacturer’s protocol
Label NA
Label protocol nCounter Mouse Inflammation Kit
 
Hybridization protocol according to the manufacturer’s protocol
Scan protocol according to the manufacturer’s protocol
Data processing Data was proccessed using nSolver, normalized to Positive controls, Housekeeping genes and negative controls
 
Submission date Nov 22, 2013
Last update date Nov 24, 2014
Contact name Oleg Butovsky
E-mail(s) obutovsky@rics.bwh.harvard.edu
Phone 1-617-525-5313
Organization name Brigham and Women's Hospital, Harvard Medical School
Department Center of Neurologic Diseases
Lab Dr. Oleg Butovsky
Street address 77 Avenue Louis Pasteur, Office 614
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL17981
Series (2)
GSE52673 Inflammation gene profile of sc-microglia in SOD mice
GSE52947 Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice

Data table header descriptions
ID_REF
VALUE Normalized mRNA transcripts copies per 100ng of total RNA

Data table
ID_REF VALUE
Cltc 313
Atf2 25
Tradd 14
Mapk1 34
Mef2b 2
Ppp1r12b 7
Rapgef2 11
Csf1 145
Il1r1 8
C1qa 2213
Cfl1 19
Ccr7 3
Crp 1
Daxx 8
Ddit3 26
Elk1 4
Ptk2 4
Gapdh 239
Gnaq 25
Gnb1 58

Total number of rows: 185

Table truncated, full table size 1 Kbytes.




Supplementary file Size Download File type/resource
GSM1273910_20111217_A_A_01.RCC.gz 2.3 Kb (ftp)(http) RCC
Processed data included within Sample table

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