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Sample GSM1278615 Query DataSets for GSM1278615
Status Public on Nov 24, 2014
Title HC A13-14
Sample type RNA
 
Source name Whole spinal cord homogenate - post mortem obtained from non ALS donor
Organism Homo sapiens
Characteristics cell type: Whole spinal cord homogenate - post mortem
phenotype: non ALS
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using mirVanaTM miRNA isolation kit (Ambion) according to the manufacturer’s protocol
Label NA
Label protocol MG447 microglial custom Nanostring codesets
 
Hybridization protocol according to the manufacturer’s protocol
Scan protocol according to the manufacturer’s protocol
Data processing Data was proccessed using nSolver, normalized to Positive controls, Housekeeping genes and negative controls
 
Submission date Dec 04, 2013
Last update date Nov 24, 2014
Contact name Oleg Butovsky
E-mail(s) obutovsky@rics.bwh.harvard.edu
Phone 1-617-525-5313
Organization name Brigham and Women's Hospital, Harvard Medical School
Department Center of Neurologic Diseases
Lab Dr. Oleg Butovsky
Street address 77 Avenue Louis Pasteur, Office 614
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL18023
Series (2)
GSE52947 Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice
GSE52959 MG447 profile of lumbar spinal cord homogenate from healthy controls and ALS

Data table header descriptions
ID_REF
VALUE Normalized mRNA transcripts copies per 100ng of total RNA

Data table
ID_REF VALUE
1810011O10Rik 67
Abca1 143
Abcc3 128
Abhd12 706
Abhd6 161
Abi1 394
Abi3 199
Acp2 48
Acvr1 157
Adamts1 377
Adamts16 5
Adap2 176
Adcyap1r1 834
Adora3 199
Adrb1 11
AGMO 58
Agpat3 306
Ahcyl1 3335
Aif1 114
Ak1 395

Total number of rows: 447

Table truncated, full table size 4 Kbytes.




Supplementary file Size Download File type/resource
GSM1278615_HC-A13-14_MG447v1hulumbar.RCC.gz 5.6 Kb (ftp)(http) RCC
Processed data included within Sample table

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