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Series GSE52959 Query DataSets for GSE52959
Status Public on Nov 24, 2014
Title MG447 profile of lumbar spinal cord homogenate from healthy controls and ALS
Organism Homo sapiens
Experiment type Other
Summary Amyotrophic lateral sclerosis (ALS) is a paralytic degenerative disease of the nervous system. In the SOD1 mouse model of ALS we found loss of the molecular and functional microglia signature associated with pronounced expression of miR-155 in SOD1 mice. We also found increased expression of miR-155 in the spinal cord of ALS subjects. Genetic ablation of miR-155 increased survival in SOD1 mice and reversed the abnormal microglial and monocyte molecular signature. In addition, dysregulated proteins in the spinal cord of SOD1 mice that we identified in human ALS spinal cords and CSF were restored in SOD1G93A/miR155-/- mice. Treatment of SOD1 mice with anti-miR-155 SOD1 mice injected systemically or into the cerebrospinal fluid prolonged survival and restored the microglial unique genetic and microRNA profiles. Our findings provide a new avenue for immune based therapy of ALS by targeting miR-155.
 
Overall design Total RNA was isolated from whole spinal cord homogenate - post mortem obtained from healthy donors without known neurologic diseases and from sALS and fALS donors. Total RNA was extracted using mirVanaTM miRNA isolation kit (Ambion) according to the manufacturer’s protocol. nCounter Nanostring custom MG447 human microglia chip was used for gene expression profile
 
Contributor(s) Butovsky O
Citation(s) 25381879
Submission date Dec 04, 2013
Last update date Nov 26, 2014
Contact name Oleg Butovsky
E-mail(s) obutovsky@rics.bwh.harvard.edu
Phone 1-617-525-5313
Organization name Brigham and Women's Hospital, Harvard Medical School
Department Center of Neurologic Diseases
Lab Dr. Oleg Butovsky
Street address 77 Avenue Louis Pasteur, Office 614
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL18023 MG447 custom Nanostring codesets
Samples (16)
GSM1278615 HC A13-14
GSM1278616 HC A13-17
GSM1278617 HC A13-18
This SubSeries is part of SuperSeries:
GSE52947 Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice
Relations
BioProject PRJNA230551

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52959_RAW.tar 110.0 Kb (http)(custom) TAR (of RCC)
Processed data included within Sample table

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