|
Status |
Public on Nov 05, 2020 |
Title |
Genomic DNA from umbilical cord blood buffycoat 359 |
Sample type |
genomic |
|
|
Source name |
umbilical cord blood buffy coat 359
|
Organism |
Homo sapiens |
Characteristics |
gender: Male tissue: Umbilical cord blood buffy coat maternal gdm status: No GDM
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Genomic DNA was extracted and purified from cord blood samples using QIAamp Blood DNA mini kit according to standard instructions.
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina Protocol.
|
|
|
Hybridization protocol |
Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human MethylationEPIC BeadChip using standard Illumina protocol.
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting.
|
Description |
U395 Umbilical cord blood sample
|
Data processing |
R v3.4.2 Beta_for_GEO.txt includes Beta-mixture Quantile (BMIQ) normalized Beta Values.
|
|
|
Submission date |
Nov 26, 2019 |
Last update date |
Nov 06, 2020 |
Contact name |
Elie Antoun |
Organization name |
University of Oxford
|
Department |
CAMS China Oxford Institute (CAMS-COI
|
Street address |
Nuffield Department of Medicine
|
City |
Oxford |
State/province |
United Kingdom |
ZIP/Postal code |
OX3 7BN |
Country |
United Kingdom |
|
|
Platform ID |
GPL21145 |
Series (1) |
GSE141065 |
Epigenome analysis of cord blood DNA from infants born into the UPBEAT study |
|