|
| Status |
Public on Nov 05, 2020 |
| Title |
Genomic DNA from umbilical cord blood buffycoat 375 |
| Sample type |
genomic |
| |
|
| Source name |
umbilical cord blood buffy coat 375
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Male
tissue: Umbilical cord blood buffy coat
maternal gdm status: No GDM
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted and purified from cord blood samples using QIAamp Blood DNA mini kit according to standard instructions.
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol.
|
| |
|
| Hybridization protocol |
Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human MethylationEPIC BeadChip using standard Illumina protocol.
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting.
|
| Description |
U414
Umbilical cord blood sample
|
| Data processing |
R v3.4.2
Beta_for_GEO.txt includes Beta-mixture Quantile (BMIQ) normalized Beta Values.
|
| |
|
| Submission date |
Nov 26, 2019 |
| Last update date |
Nov 06, 2020 |
| Contact name |
Elie Antoun |
| Organization name |
University of Oxford
|
| Department |
CAMS China Oxford Institute (CAMS-COI
|
| Street address |
Nuffield Department of Medicine
|
| City |
Oxford |
| State/province |
United Kingdom |
| ZIP/Postal code |
OX3 7BN |
| Country |
United Kingdom |
| |
|
| Platform ID |
GPL21145 |
| Series (1) |
| GSE141065 |
Epigenome analysis of cord blood DNA from infants born into the UPBEAT study |
|
