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    ankar ankyrin and armadillo repeat containing [ Danio rerio (zebrafish) ]

    Gene ID: 368636, updated on 27-Mar-2024

    Summary

    Official Symbol
    ankarprovided by ZNC
    Official Full Name
    ankyrin and armadillo repeat containingprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030616-533
    See related
    Ensembl:ENSDARG00000000516 AllianceGenome:ZFIN:ZDB-GENE-030616-533
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:136667; si:dz72b14.8; si:dz211o13.9; si:busm1-72b14.8; si:busm1-211o13.9
    Summary
    Orthologous to human ANKAR (ankyrin and armadillo repeat containing). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See ankar in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (41045874..41077898, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (41244087..41276111, complement)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene ORMDL sphingolipid biosynthesis regulator 1 Neighboring gene adenosine deaminase tRNA specific 3 Neighboring gene O-sialoglycoprotein endopeptidase-like 1 Neighboring gene zgc:136439 Neighboring gene asparagine synthetase domain containing 1 Neighboring gene solute carrier family 40 member 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    ankyrin and armadillo repeat-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001040046.2NP_001035135.2  ankyrin and armadillo repeat-containing protein

      Status: VALIDATED

      Source sequence(s)
      BC114243, CT737230
      UniProtKB/TrEMBL
      A0A8M1N8U9, F1QF11
      Related
      ENSDARP00000091115.4, ENSDART00000100342.5
      Conserved Domains (7) summary
      cd00020
      Location:819937
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      cd00204
      Location:569691
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:574663
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:638691
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:569599
      ANK; ANK repeat [structural motif]
      sd00044
      Location:9901019
      HEAT; HEAT repeat [structural motif]
      sd00043
      Location:868893
      ARM; armadillo repeat [structural motif]

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      41045874..41077898 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001007039.1: Suppressed sequence

      Description
      NM_001007039.1: This RefSeq was temporarily suppressed because the CDS was partial.