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    TRMT5 tRNA methyltransferase 5 [ Canis lupus familiaris (dog) ]

    Gene ID: 480347, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TRMT5provided by VGNC
    Official Full Name
    tRNA methyltransferase 5provided by VGNC
    Primary source
    VGNC:VGNC:47859
    See related
    Ensembl:ENSCAFG00845022897
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See TRMT5 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (36185634..36194515, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (35705590..35714105, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (36235460..36244350, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (35796181..35805034, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (35873622..35882503, complement)

    Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene MNAT1 component of CDK activating kinase Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin domain-containing protein UBFD1-like Neighboring gene solute carrier family 38 member 6 Neighboring gene 60S ribosomal protein L15-like Neighboring gene uncharacterized LOC111097065

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitochondrial tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA N1-guanine methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (guanine(37)-N1)-methyltransferase; LOW QUALITY PROTEIN: tRNA (guanine(37)-N1)-methyltransferase
    Names
    TRM5 tRNA methyltransferase 5 homolog
    tRNA methyltransferase 5 homolog
    XP_005623533.1
    XP_038339345.1
    XP_038400809.1
    XP_038464922.1
    XP_038529727.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051812.1 Reference ROS_Cfam_1.0

      Range
      36185634..36194515 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038673799.1 → XP_038529727.1  LOW QUALITY PROTEIN: tRNA (guanine(37)-N1)-methyltransferase

      UniProtKB/TrEMBL
      A0A8C0K450, A0A8C0PGY9, A0A8I3PCI7
      Related
      ENSCAFP00845031653.1, ENSCAFT00845040423.1
      Conserved Domains (1) summary
      COG2520
      Location:95 → 468
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049268.1 Alternate UMICH_Zoey_3.1

      Range
      35796181..35805034 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038483417.1 → XP_038339345.1  LOW QUALITY PROTEIN: tRNA (guanine(37)-N1)-methyltransferase

      Conserved Domains (1) summary
      COG2520
      Location:95 → 468
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

      Range
      35873622..35882503 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038608994.1 → XP_038464922.1  LOW QUALITY PROTEIN: tRNA (guanine(37)-N1)-methyltransferase

      Conserved Domains (1) summary
      COG2520
      Location:95 → 468
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

      Range
      36235460..36244350 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038544881.1 → XP_038400809.1  LOW QUALITY PROTEIN: tRNA (guanine(37)-N1)-methyltransferase

      UniProtKB/TrEMBL
      A0A8C0K450, A0A8C0PGY9, A0A8I3PCI7
      Conserved Domains (1) summary
      COG2520
      Location:95 → 468
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      35705590..35714105 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005623476.4 → XP_005623533.1  LOW QUALITY PROTEIN: tRNA (guanine(37)-N1)-methyltransferase

      UniProtKB/TrEMBL
      A0A8C0K450, A0A8C0PGY9, A0A8I3PCI7
      Conserved Domains (1) summary
      COG2520
      Location:95 → 468
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
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