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    LRRC58 leucine rich repeat containing 58 [ Canis lupus familiaris (dog) ]

    Gene ID: 488001, updated on 5-Mar-2024

    Summary

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    Official Symbol
    LRRC58provided by VGNC
    Official Full Name
    leucine rich repeat containing 58provided by VGNC
    Primary source
    VGNC:VGNC:56127
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See LRRC58 in Genome Data Viewer
    Location:
    chromosome: 33
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 33 NC_051837.1 (24081600..24101985, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 33 NC_006615.4 (23871217..23891596, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 33 NC_049254.1 (24486998..24507383, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 33 NC_049293.1 (23882593..23902964, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 33 NC_049774.1 (23923410..23943761, complement)

    Chromosome 33 - NC_051837.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L32-like Neighboring gene uncharacterized LOC102157026 Neighboring gene G protein-coupled receptor 156 Neighboring gene follistatin like 1 Neighboring gene 40S ribosomal protein S15a-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 58

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051837.1 Reference ROS_Cfam_1.0

      Range
      24081600..24101985 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038445075.1 → XP_038301003.1  leucine-rich repeat-containing protein 58

      Conserved Domains (2) summary
      COG4886
      Location:62 → 242
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:65 → 87
      LRR_RI; leucine-rich repeat [structural motif]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049293.1 Alternate UMICH_Zoey_3.1

      Range
      23882593..23902964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038519336.1 → XP_038375264.1  leucine-rich repeat-containing protein 58

      Conserved Domains (2) summary
      COG4886
      Location:62 → 242
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:65 → 87
      LRR_RI; leucine-rich repeat [structural motif]

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049774.1 Alternate UNSW_CanFamBas_1.0

      Range
      23923410..23943761 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038647345.1 → XP_038503273.1  leucine-rich repeat-containing protein 58

      Conserved Domains (2) summary
      COG4886
      Location:62 → 242
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:65 → 87
      LRR_RI; leucine-rich repeat [structural motif]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049254.1 Alternate UU_Cfam_GSD_1.0

      Range
      24486998..24507383 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038582958.1 → XP_038438886.1  leucine-rich repeat-containing protein 58

      Conserved Domains (2) summary
      COG4886
      Location:62 → 242
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:65 → 87
      LRR_RI; leucine-rich repeat [structural motif]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006615.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      23871217..23891596 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_545123.6 → XP_545123.4  leucine-rich repeat-containing protein 58

      Conserved Domains (2) summary
      COG4886
      Location:62 → 242
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:65 → 87
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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