>gnl|dbSNP|ss3374150|allelePos=472|len=829|taxid=9606|alleles='C/T'|mol=Genomic
GGAAAACGTC AAAGCCATGA TGAGGAAGAC AGCAAGGCCA GATGCAGGGA GCACCTTCAT
CCCCTCACAG TAGCTTGGTA ATTATATCAG CCTGGGGGAT GGCAGACAGT GCACGTTTGC
ACTTCGACCT TGAGCTCCTT TTATAGAGTC AAACAGGTCT GGACCCTCCG AGCAAGGATG
ATTCATGTCT CAAACAGTAA TTATACAGCT CATTTCTCTC CCTGATGATG GGGTAACACA
ACTGTACACA GGAATCAGGG AAAGCTTCAT ATTTTTTTTG TTATTTACCA AGTGGCAAAA
GGAGAAAAAC AGTCACTTTT AATGAAGTTG GTCAGCTAGT TACAAAAATT GAAGTAAACT
TGATTGATTT GAACCCAACT CAACTGAAAC ATTTGATTAG TCTTCATTTG GGGGCCTTTT
TCCATTCTGA TTACAGAAAA GTTAGATGAT TACAGTATAA TTGAATTTGT C
Y
TCCAAGTAAT CCCAAACTCC CCATGCATTC AACCCAATCG CCTGTATCTC CTGCATTCAC
TTCAAAATTT CTTAGTAGCA ACTGCTGTTC ATAATGACGG CTCTGAGACA CATAAGATCC
TGAATCATCA AGGCAAGATT ACATTATACT GTGCTGACTT AGGGTGGAAA GTGAACTGGT
AACTGTTAGA AAGCTTTTGG ATGAATTAAG GCAAGAGTTA CGTCTTCGTT AACCAAAACA
ATAGCCAGAA CTCCCCAATC TCTGTGTACT CTGGTTAATT GGAGTCATAT TGTTTTTCCT
GGGTCTGATT AAGATGGATT TGGATCCAGA GATGATATGG TGAAATGGTG TCATATG
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | T=0.75221241
| C=0.24778761 | T/T=0.57522124
C/T=0.35398230
C/C=0.07079646
| Pr(chiSq=0.287,df=1)
=0.655 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | T=0.87209302
| C=0.12790698 | T/T=0.79069769
C/T=0.16279070
C/C=0.04651163
| Pr(chiSq=3.142,df=1)
=0.100 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | T=0.87209302
| C=0.12790698 | T/T=0.74418604
C/T=0.25581396
| Pr(chiSq=0.443,df=1)
=0.527 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | T=0.57964599
| C=0.42035398 | C/T=0.48672566
T/T=0.33628318
C/C=0.17699115
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | T=0.66326529
| C=0.33673468 | T/T=0.46938777
C/T=0.38775510
C/C=0.14285715
| Pr(chiSq=0.853,df=1)
=0.371 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | T=0.91463417
| C=0.08536585 | T/T=0.85365856
C/T=0.12195122
C/C=0.02439024
| Pr(chiSq=1.967,df=1)
=0.200 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | T=0.90588236
| C=0.09411765 | T/T=0.81176472
C/T=0.18823530
| Pr(chiSq=0.165,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-GIH | 174 | 174 | T=0.77586210
| C=0.22413793 | T/T=0.59770113
C/T=0.35632184
C/C=0.04597701
| Pr(chiSq=0.052,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | T=0.65555555
| C=0.34444445 | C/T=0.51111114
T/T=0.40000001
C/C=0.08888889
| Pr(chiSq=1.563,df=1)
=0.251 | Genotype
Freq. |
| HAPMAP-MEX | 96 | 96 | T=0.75000000
| C=0.25000000 | T/T=0.54166669
C/T=0.41666666
C/C=0.04166667
| Pr(chiSq=0.593,df=1)
=0.479 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | T=0.72727275
| C=0.27272728 | T/T=0.53846157
C/T=0.37762237
C/C=0.08391608
| Pr(chiSq=0.331,df=1)
=0.584 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.76136363
| C=0.23863636 | T/T=0.60227275
C/T=0.31818181
C/C=0.07954545
| Pr(chiSq=1.361,df=1)
=0.251 | Genotype
Freq. |
