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    atad2 ATPase family, AAA domain containing 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100496913, updated on 8-Mar-2024

    Summary

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    Official Symbol
    atad2provided by Xenbase
    Official Full Name
    ATPase family, AAA domain containing 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-995542
    See related
    Ensembl:ENSXETG00000023215
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (139800932..139825892, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683417.1 (572922..597820)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 83 member A Neighboring gene zinc fingers and homeoboxes 1 Neighboring gene N-terminal glutamine amidase 1 Neighboring gene F-box protein 32

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ATPase family AAA domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      139800932..139825892 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031903490.1 → XP_031759350.1  ATPase family AAA domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A310T8I5, A0A8J1JQP9
      Conserved Domains (3) summary
      cd05528
      Location:980 → 1091
      Bromo_AAA; Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this ...
      COG0464
      Location:441 → 928
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
      cd19517
      Location:423 → 592
      RecA-like_Yta7-like; ATPase domain of Saccharomyces cerevisiae Yta7 and similar ATPase domains

    2. XM_012965173.3 → XP_012820627.1  ATPase family AAA domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A310T8I5, A0A6I8RDE6
      Related
      ENSXETP00000079817.2, ENSXETT00000069775.2
      Conserved Domains (3) summary
      cd05528
      Location:981 → 1092
      Bromo_AAA; Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this ...
      CHL00195
      Location:709 → 929
      ycf46; Ycf46; Provisional
      TIGR01243
      Location:420 → 692
      CDC48; AAA family ATPase, CDC48 subfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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